STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A5C3MZ89PLP-dependent transferase. (427 aa)    
Predicted Functional Partners:
A0A5C3NJB7
Biotin synthase.
 
 0.944
A0A5C3MX42
PLP-dependent transferase.
 
  
 0.933
A0A5C3NBP5
Tryptophan synthase.
    
 0.907
A0A5C3MTN9
NAD(P)-binding protein.
  
 
 0.841
A0A5C3NHP8
Beta_elim_lyase domain-containing protein.
   
 
 0.817
A0A5C3N3E1
Oxidoreductase.
     
 0.796
A0A5C3N8G3
Oxidoreductase.
     
 0.796
A0A5C3NGB2
Oxidoreductase.
     
 0.796
A0A5C3MV69
Serine hydroxymethyltransferase; Interconversion of serine and glycine. Belongs to the SHMT family.
  
 
 0.794
A0A5C3N204
PLP-dependent transferase.
    
 0.773
Your Current Organism:
Heliocybe sulcata
NCBI taxonomy Id: 5364
Other names: H. sulcata, Lentinus sulcatus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.