STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A5C3MZG6P4Hc domain-containing protein. (636 aa)    
Predicted Functional Partners:
A0A5C3MNN0
Uncharacterized protein.
   
 
 0.992
A0A5C3NDV4
Uncharacterized protein.
   
 
 0.906
A0A5C3NTY7
Elongation factor Tu; This protein promotes the GTP-dependent binding of aminoacyl- tRNA to the A-site of ribosomes during protein biosynthesis.
   
   0.861
A0A5C3NED2
Uncharacterized protein.
    
  0.688
A0A5C3MYJ0
Coproporphyrinogen oxidase.
   
  
 0.645
A0A5C3NDF5
tRNA (guanine(26)-N(2))-dimethyltransferase.
   
 
 0.638
A0A5C3N8C1
DUF663-domain-containing protein.
   
    0.631
A0A5C3NIH7
DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
   
    0.617
A0A5C3MWW7
BHLH domain-containing protein.
   
 
 0.615
A0A5C3MY15
DUF663-domain-containing protein.
   
    0.615
Your Current Organism:
Heliocybe sulcata
NCBI taxonomy Id: 5364
Other names: H. sulcata, Lentinus sulcatus
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