STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A5C3MZL2Uncharacterized protein. (373 aa)    
Predicted Functional Partners:
A0A5C3NHU1
Methylmalonate-semialdehyde dehydrogenase.
   
 0.755
A0A5C3NSH1
DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
    
 0.753
A0A5C3MM34
V-type proton ATPase subunit a; Essential component of the vacuolar proton pump (V-ATPase), a multimeric enzyme that catalyzes the translocation of protons across the membranes. Required for assembly and activity of the V-ATPase.
    
  0.742
A0A5C3N248
RPOL4c domain-containing protein.
    
  0.732
A0A5C3N0B3
DNA-directed RNA polymerase RPB5 subunit.
    
 0.726
A0A5C3NJ30
Uncharacterized protein.
    
  0.723
A0A5C3NG18
Putative DNA-directed RNA polymerase subunit.
    
  0.722
A0A5C3N723
ATPase, V0 complex, subunit D.
    
 0.721
A0A5C3NB20
RBP11-like subunits of RNA polymerase.
    
  0.720
A0A5C3N881
Uncharacterized protein; Belongs to the V-ATPase proteolipid subunit family.
    
 0.716
Your Current Organism:
Heliocybe sulcata
NCBI taxonomy Id: 5364
Other names: H. sulcata, Lentinus sulcatus
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