Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
A0A5C3MP84 | A0A5C3MPG4 | Histone H2A; Belongs to the histone H2A family. | Uncharacterized protein. | 0.698 |
A0A5C3MP84 | A0A5C3N160 | Histone H2A; Belongs to the histone H2A family. | F-box domain-containing protein. | 0.548 |
A0A5C3MP84 | A0A5C3N1U2 | Histone H2A; Belongs to the histone H2A family. | JmjC-domain-containing protein. | 0.989 |
A0A5C3MP84 | A0A5C3N2Z6 | Histone H2A; Belongs to the histone H2A family. | F-box domain-containing protein. | 0.960 |
A0A5C3MP84 | A0A5C3N7K6 | Histone H2A; Belongs to the histone H2A family. | Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. | 0.962 |
A0A5C3MP84 | A0A5C3NBM7 | Histone H2A; Belongs to the histone H2A family. | B30.2/SPRY domain-containing protein. | 0.857 |
A0A5C3MP84 | A0A5C3NIT3 | Histone H2A; Belongs to the histone H2A family. | Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. | 0.962 |
A0A5C3MP84 | A0A5C3NJD3 | Histone H2A; Belongs to the histone H2A family. | WD40 repeat-like protein. | 0.879 |
A0A5C3MP84 | A0A5C3NK65 | Histone H2A; Belongs to the histone H2A family. | WD40 repeat-like protein. | 0.826 |
A0A5C3MP84 | A0A5C3NKL6 | Histone H2A; Belongs to the histone H2A family. | WD_REPEATS_REGION domain-containing protein. | 0.658 |
A0A5C3MPG4 | A0A5C3MP84 | Uncharacterized protein. | Histone H2A; Belongs to the histone H2A family. | 0.698 |
A0A5C3MPG4 | A0A5C3N160 | Uncharacterized protein. | F-box domain-containing protein. | 0.523 |
A0A5C3MPG4 | A0A5C3N1U2 | Uncharacterized protein. | JmjC-domain-containing protein. | 0.558 |
A0A5C3MPG4 | A0A5C3N2Z6 | Uncharacterized protein. | F-box domain-containing protein. | 0.747 |
A0A5C3MPG4 | A0A5C3N7K6 | Uncharacterized protein. | Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. | 0.747 |
A0A5C3MPG4 | A0A5C3NBM7 | Uncharacterized protein. | B30.2/SPRY domain-containing protein. | 0.708 |
A0A5C3MPG4 | A0A5C3NIT3 | Uncharacterized protein. | Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. | 0.747 |
A0A5C3MPG4 | A0A5C3NJD3 | Uncharacterized protein. | WD40 repeat-like protein. | 0.709 |
A0A5C3MPG4 | A0A5C3NK65 | Uncharacterized protein. | WD40 repeat-like protein. | 0.684 |
A0A5C3N160 | A0A5C3MP84 | F-box domain-containing protein. | Histone H2A; Belongs to the histone H2A family. | 0.548 |
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