A0A5C3N3C2 protein (Heliocybe sulcata) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

A0A5C3N3C2

HECT domain-containing protein. (1938 aa)

Predicted Functional Partners:

A0A5C3MST7

0.999

A0A5C3MQ20

0.995

A0A5C3MZ33

0.995

A0A5C3MZR5

0.995

A0A5C3NEA1

0.995

A0A5C3NGP1

0.995

A0A5C3NHW4

0.995

A0A5C3N9I3

0.994

A0A5C3NIH2

0.989

A0A5C3NN77

0.989

Your Current Organism:

Heliocybe sulcata

NCBI taxonomy Id: 5364
Other names: H. sulcata, Lentinus sulcatus

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A5C3MQ20	A0A5C3MST7	UBIQUITIN_CONJUGAT_2 domain-containing protein.	E3 ubiquitin-protein ligase; Ubiquitin ligase protein which is a component of the N-end rule pathway. Recognizes and binds to proteins bearing specific N- terminal residues that are destabilizing according to the N-end rule, leading to their ubiquitination and subsequent degradation.	0.482
A0A5C3MQ20	A0A5C3MZ33	UBIQUITIN_CONJUGAT_2 domain-containing protein.	Ubiquitin-conjugating enzyme E2; Belongs to the ubiquitin-conjugating enzyme family.	0.697
A0A5C3MQ20	A0A5C3MZR5	UBIQUITIN_CONJUGAT_2 domain-containing protein.	Ubiquitin-conjugating enzyme; Belongs to the ubiquitin-conjugating enzyme family.	0.682
A0A5C3MQ20	A0A5C3N3C2	UBIQUITIN_CONJUGAT_2 domain-containing protein.	HECT domain-containing protein.	0.995
A0A5C3MQ20	A0A5C3N9I3	UBIQUITIN_CONJUGAT_2 domain-containing protein.	U-box domain-containing protein.	0.687
A0A5C3MQ20	A0A5C3NGP1	UBIQUITIN_CONJUGAT_2 domain-containing protein.	UBC-like protein.	0.532
A0A5C3MQ20	A0A5C3NIH2	UBIQUITIN_CONJUGAT_2 domain-containing protein.	Ubiquitin activating enzyme.	0.926
A0A5C3MQ20	A0A5C3NN77	UBIQUITIN_CONJUGAT_2 domain-containing protein.	E2_bind domain-containing protein.	0.783
A0A5C3MST7	A0A5C3MQ20	E3 ubiquitin-protein ligase; Ubiquitin ligase protein which is a component of the N-end rule pathway. Recognizes and binds to proteins bearing specific N- terminal residues that are destabilizing according to the N-end rule, leading to their ubiquitination and subsequent degradation.	UBIQUITIN_CONJUGAT_2 domain-containing protein.	0.482
A0A5C3MST7	A0A5C3MZ33	E3 ubiquitin-protein ligase; Ubiquitin ligase protein which is a component of the N-end rule pathway. Recognizes and binds to proteins bearing specific N- terminal residues that are destabilizing according to the N-end rule, leading to their ubiquitination and subsequent degradation.	Ubiquitin-conjugating enzyme E2; Belongs to the ubiquitin-conjugating enzyme family.	0.608
A0A5C3MST7	A0A5C3MZR5	E3 ubiquitin-protein ligase; Ubiquitin ligase protein which is a component of the N-end rule pathway. Recognizes and binds to proteins bearing specific N- terminal residues that are destabilizing according to the N-end rule, leading to their ubiquitination and subsequent degradation.	Ubiquitin-conjugating enzyme; Belongs to the ubiquitin-conjugating enzyme family.	0.533
A0A5C3MST7	A0A5C3N3C2	E3 ubiquitin-protein ligase; Ubiquitin ligase protein which is a component of the N-end rule pathway. Recognizes and binds to proteins bearing specific N- terminal residues that are destabilizing according to the N-end rule, leading to their ubiquitination and subsequent degradation.	HECT domain-containing protein.	0.999
A0A5C3MST7	A0A5C3N9I3	E3 ubiquitin-protein ligase; Ubiquitin ligase protein which is a component of the N-end rule pathway. Recognizes and binds to proteins bearing specific N- terminal residues that are destabilizing according to the N-end rule, leading to their ubiquitination and subsequent degradation.	U-box domain-containing protein.	0.607
A0A5C3MST7	A0A5C3NEA1	E3 ubiquitin-protein ligase; Ubiquitin ligase protein which is a component of the N-end rule pathway. Recognizes and binds to proteins bearing specific N- terminal residues that are destabilizing according to the N-end rule, leading to their ubiquitination and subsequent degradation.	Uncharacterized protein.	0.482
A0A5C3MST7	A0A5C3NGP1	E3 ubiquitin-protein ligase; Ubiquitin ligase protein which is a component of the N-end rule pathway. Recognizes and binds to proteins bearing specific N- terminal residues that are destabilizing according to the N-end rule, leading to their ubiquitination and subsequent degradation.	UBC-like protein.	0.482
A0A5C3MST7	A0A5C3NHW4	E3 ubiquitin-protein ligase; Ubiquitin ligase protein which is a component of the N-end rule pathway. Recognizes and binds to proteins bearing specific N- terminal residues that are destabilizing according to the N-end rule, leading to their ubiquitination and subsequent degradation.	Uncharacterized protein.	0.482
A0A5C3MST7	A0A5C3NIH2	E3 ubiquitin-protein ligase; Ubiquitin ligase protein which is a component of the N-end rule pathway. Recognizes and binds to proteins bearing specific N- terminal residues that are destabilizing according to the N-end rule, leading to their ubiquitination and subsequent degradation.	Ubiquitin activating enzyme.	0.587
A0A5C3MST7	A0A5C3NN77	E3 ubiquitin-protein ligase; Ubiquitin ligase protein which is a component of the N-end rule pathway. Recognizes and binds to proteins bearing specific N- terminal residues that are destabilizing according to the N-end rule, leading to their ubiquitination and subsequent degradation.	E2_bind domain-containing protein.	0.661
A0A5C3MZ33	A0A5C3MQ20	Ubiquitin-conjugating enzyme E2; Belongs to the ubiquitin-conjugating enzyme family.	UBIQUITIN_CONJUGAT_2 domain-containing protein.	0.697
A0A5C3MZ33	A0A5C3MST7	Ubiquitin-conjugating enzyme E2; Belongs to the ubiquitin-conjugating enzyme family.	E3 ubiquitin-protein ligase; Ubiquitin ligase protein which is a component of the N-end rule pathway. Recognizes and binds to proteins bearing specific N- terminal residues that are destabilizing according to the N-end rule, leading to their ubiquitination and subsequent degradation.	0.608