Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
A0A5C3MSC1 | A0A5C3MVU4 | Ribonuclease; Endonuclease that specifically degrades the RNA of RNA-DNA hybrids; Belongs to the RNase HII family. | DNA primase; Belongs to the eukaryotic-type primase small subunit family. | 0.916 |
A0A5C3MSC1 | A0A5C3N3H6 | Ribonuclease; Endonuclease that specifically degrades the RNA of RNA-DNA hybrids; Belongs to the RNase HII family. | Queuosine salvage protein; Involved in salvaging queuosine. | 0.585 |
A0A5C3MSC1 | A0A5C3NBH0 | Ribonuclease; Endonuclease that specifically degrades the RNA of RNA-DNA hybrids; Belongs to the RNase HII family. | DNA primase large subunit; DNA primase is the polymerase that synthesizes small RNA primers for the Okazaki fragments made during discontinuous DNA replication; Belongs to the eukaryotic-type primase large subunit family. | 0.818 |
A0A5C3MVU4 | A0A5C3MSC1 | DNA primase; Belongs to the eukaryotic-type primase small subunit family. | Ribonuclease; Endonuclease that specifically degrades the RNA of RNA-DNA hybrids; Belongs to the RNase HII family. | 0.916 |
A0A5C3MVU4 | A0A5C3N3H6 | DNA primase; Belongs to the eukaryotic-type primase small subunit family. | Queuosine salvage protein; Involved in salvaging queuosine. | 0.471 |
A0A5C3MVU4 | A0A5C3NBH0 | DNA primase; Belongs to the eukaryotic-type primase small subunit family. | DNA primase large subunit; DNA primase is the polymerase that synthesizes small RNA primers for the Okazaki fragments made during discontinuous DNA replication; Belongs to the eukaryotic-type primase large subunit family. | 0.999 |
A0A5C3N3H6 | A0A5C3MSC1 | Queuosine salvage protein; Involved in salvaging queuosine. | Ribonuclease; Endonuclease that specifically degrades the RNA of RNA-DNA hybrids; Belongs to the RNase HII family. | 0.585 |
A0A5C3N3H6 | A0A5C3MVU4 | Queuosine salvage protein; Involved in salvaging queuosine. | DNA primase; Belongs to the eukaryotic-type primase small subunit family. | 0.471 |
A0A5C3N3H6 | A0A5C3N9F5 | Queuosine salvage protein; Involved in salvaging queuosine. | Queuine tRNA-ribosyltransferase catalytic subunit 1; Catalytic subunit of the queuine tRNA-ribosyltransferase (TGT) that catalyzes the base-exchange of a guanine (G) residue with queuine (Q) at position 34 (anticodon wobble position) in tRNAs with GU(N) anticodons (tRNA-Asp, -Asn, -His and -Tyr), resulting in the hypermodified nucleoside queuosine (7-(((4,5-cis-dihydroxy-2- cyclopenten-1-yl)amino)methyl)-7-deazaguanosine). Catalysis occurs through a double-displacement mechanism. The nucleophile active site attacks the C1' of nucleotide 34 to detach the guanine base from the RNA, formi [...] | 0.471 |
A0A5C3N3H6 | A0A5C3NBH0 | Queuosine salvage protein; Involved in salvaging queuosine. | DNA primase large subunit; DNA primase is the polymerase that synthesizes small RNA primers for the Okazaki fragments made during discontinuous DNA replication; Belongs to the eukaryotic-type primase large subunit family. | 0.422 |
A0A5C3N3H6 | A0A5C3NFJ0 | Queuosine salvage protein; Involved in salvaging queuosine. | Translation machinery-associated protein 20; Involved in translation; Belongs to the TMA20 family. | 0.645 |
A0A5C3N9F5 | A0A5C3N3H6 | Queuine tRNA-ribosyltransferase catalytic subunit 1; Catalytic subunit of the queuine tRNA-ribosyltransferase (TGT) that catalyzes the base-exchange of a guanine (G) residue with queuine (Q) at position 34 (anticodon wobble position) in tRNAs with GU(N) anticodons (tRNA-Asp, -Asn, -His and -Tyr), resulting in the hypermodified nucleoside queuosine (7-(((4,5-cis-dihydroxy-2- cyclopenten-1-yl)amino)methyl)-7-deazaguanosine). Catalysis occurs through a double-displacement mechanism. The nucleophile active site attacks the C1' of nucleotide 34 to detach the guanine base from the RNA, formi [...] | Queuosine salvage protein; Involved in salvaging queuosine. | 0.471 |
A0A5C3NBH0 | A0A5C3MSC1 | DNA primase large subunit; DNA primase is the polymerase that synthesizes small RNA primers for the Okazaki fragments made during discontinuous DNA replication; Belongs to the eukaryotic-type primase large subunit family. | Ribonuclease; Endonuclease that specifically degrades the RNA of RNA-DNA hybrids; Belongs to the RNase HII family. | 0.818 |
A0A5C3NBH0 | A0A5C3MVU4 | DNA primase large subunit; DNA primase is the polymerase that synthesizes small RNA primers for the Okazaki fragments made during discontinuous DNA replication; Belongs to the eukaryotic-type primase large subunit family. | DNA primase; Belongs to the eukaryotic-type primase small subunit family. | 0.999 |
A0A5C3NBH0 | A0A5C3N3H6 | DNA primase large subunit; DNA primase is the polymerase that synthesizes small RNA primers for the Okazaki fragments made during discontinuous DNA replication; Belongs to the eukaryotic-type primase large subunit family. | Queuosine salvage protein; Involved in salvaging queuosine. | 0.422 |
A0A5C3NFJ0 | A0A5C3N3H6 | Translation machinery-associated protein 20; Involved in translation; Belongs to the TMA20 family. | Queuosine salvage protein; Involved in salvaging queuosine. | 0.645 |