STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A5C3N471Uncharacterized protein. (75 aa)    
Predicted Functional Partners:
A0A5C3NDA3
Spindle pole body component.
    
 0.997
A0A5C3NDJ2
Spindle pole body component.
    
 0.996
A0A5C3MU93
Spindle pole body component.
    
 0.988
A0A5C3ND61
Spindle pole body component.
    
 0.987
A0A5C3NH75
Spindle pole body component.
    
 0.984
A0A5C3NBI0
Tubulin gamma chain; Tubulin is the major constituent of microtubules. The gamma chain is found at microtubule organizing centers (MTOC) such as the spindle poles or the centrosome.
   
 0.983
A0A5C3MPE2
Carboxyl transferase.
   
 0.691
A0A5C3NG66
Uncharacterized protein.
    
 0.636
A0A5C3MWC0
CXC domain-containing protein.
    
 0.534
A0A5C3MWK7
SET domain-containing protein.
    
 0.534
Your Current Organism:
Heliocybe sulcata
NCBI taxonomy Id: 5364
Other names: H. sulcata, Lentinus sulcatus
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