STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A5C3N4U9Uncharacterized protein. (462 aa)    
Predicted Functional Partners:
A0A5C3N3T3
Ribosomal protein S19; Belongs to the universal ribosomal protein uS19 family.
   
  0.830
A0A5C3NLT0
Ribosomal_S17_N domain-containing protein.
   
  0.830
A0A5C3NK60
40S ribosomal protein S3; Belongs to the universal ribosomal protein uS3 family.
   
 0.825
A0A5C3NJ68
40S ribosomal protein S7; Belongs to the eukaryotic ribosomal protein eS7 family.
   
 0.823
RPS1
40S ribosomal protein S1; Belongs to the eukaryotic ribosomal protein eS1 family.
   
 0.822
A0A5C3NR84
40S ribosomal protein S25; Belongs to the eukaryotic ribosomal protein eS25 family.
   
  0.822
A0A5C3NAP0
40S ribosomal protein S8; Belongs to the eukaryotic ribosomal protein eS8 family.
   
  0.819
A0A5C3MXX1
Ribosomal protein S1.
   
  0.816
A0A5C3NLB8
40S ribosomal protein S29.
   
 0.816
A0A5C3N7N3
Ribosomal protein S19e.
   
 0.807
Your Current Organism:
Heliocybe sulcata
NCBI taxonomy Id: 5364
Other names: H. sulcata, Lentinus sulcatus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.