A0A5C3N5B0 protein (Heliocybe sulcata) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

A0A5C3N5B0

Lipid droplet-associated perilipin protein. (368 aa)

Predicted Functional Partners:

A0A5C3MV32

0.704

A0A5C3NC22

0.704

A0A5C3NHV7

0.704

A0A5C3NKW6

0.643

A0A5C3MZD7

0.626

A0A5C3NDY1

0.620

A0A5C3MW87

0.585

A0A5C3ND23

0.585

A0A5C3N552

0.560

A0A5C3NFS6

0.560

Your Current Organism:

Heliocybe sulcata

NCBI taxonomy Id: 5364
Other names: H. sulcata, Lentinus sulcatus

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A5C3MV32	A0A5C3N5B0	Protein kinase C; Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family. PKC subfamily.	Lipid droplet-associated perilipin protein.	0.704
A0A5C3MW87	A0A5C3N5B0	Uncharacterized protein.	Lipid droplet-associated perilipin protein.	0.585
A0A5C3MW87	A0A5C3NDY1	Uncharacterized protein.	Importin N-terminal domain-containing protein.	0.428
A0A5C3MZD7	A0A5C3N5B0	Cyclin N-terminal domain-containing protein.	Lipid droplet-associated perilipin protein.	0.626
A0A5C3N552	A0A5C3N5B0	AMPKBI domain-containing protein.	Lipid droplet-associated perilipin protein.	0.560
A0A5C3N5B0	A0A5C3MV32	Lipid droplet-associated perilipin protein.	Protein kinase C; Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family. PKC subfamily.	0.704
A0A5C3N5B0	A0A5C3MW87	Lipid droplet-associated perilipin protein.	Uncharacterized protein.	0.585
A0A5C3N5B0	A0A5C3MZD7	Lipid droplet-associated perilipin protein.	Cyclin N-terminal domain-containing protein.	0.626
A0A5C3N5B0	A0A5C3N552	Lipid droplet-associated perilipin protein.	AMPKBI domain-containing protein.	0.560
A0A5C3N5B0	A0A5C3NC22	Lipid droplet-associated perilipin protein.	Phorbol-ester/DAG-type domain-containing protein.	0.704
A0A5C3N5B0	A0A5C3ND23	Lipid droplet-associated perilipin protein.	Polyadenylate-binding protein; Binds the poly(A) tail of mRNA. Belongs to the polyadenylate-binding protein type-1 family.	0.585
A0A5C3N5B0	A0A5C3NDY1	Lipid droplet-associated perilipin protein.	Importin N-terminal domain-containing protein.	0.620
A0A5C3N5B0	A0A5C3NFS6	Lipid droplet-associated perilipin protein.	AMPK1_CBM domain-containing protein.	0.560
A0A5C3N5B0	A0A5C3NHV7	Lipid droplet-associated perilipin protein.	Uncharacterized protein.	0.704
A0A5C3N5B0	A0A5C3NKW6	Lipid droplet-associated perilipin protein.	Uncharacterized protein; Belongs to the nucleosome assembly protein (NAP) family.	0.643
A0A5C3NC22	A0A5C3N5B0	Phorbol-ester/DAG-type domain-containing protein.	Lipid droplet-associated perilipin protein.	0.704
A0A5C3ND23	A0A5C3N5B0	Polyadenylate-binding protein; Binds the poly(A) tail of mRNA. Belongs to the polyadenylate-binding protein type-1 family.	Lipid droplet-associated perilipin protein.	0.585
A0A5C3ND23	A0A5C3NDY1	Polyadenylate-binding protein; Binds the poly(A) tail of mRNA. Belongs to the polyadenylate-binding protein type-1 family.	Importin N-terminal domain-containing protein.	0.543
A0A5C3NDY1	A0A5C3MW87	Importin N-terminal domain-containing protein.	Uncharacterized protein.	0.428
A0A5C3NDY1	A0A5C3N5B0	Importin N-terminal domain-containing protein.	Lipid droplet-associated perilipin protein.	0.620