STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A5C3N6K5PLP-dependent transferase. (436 aa)    
Predicted Functional Partners:
A0A5C3NH76
Iron-sulfur cluster assembly protein; Scaffold protein for the de novo synthesis of iron-sulfur (Fe-S) clusters within mitochondria, which is required for maturation of both mitochondrial and cytoplasmic [2Fe-2S] and [4Fe-4S] proteins.
  
 0.994
A0A5C3NMM3
Frataxin.
   
 0.961
A0A5C3MT31
HIRA-interacting protein 5.
  
 0.913
A0A5C3N311
Zn(2)-C6 fungal-type domain-containing protein.
   
 0.903
A0A5C3N5J6
Uncharacterized protein; Belongs to the complex I LYR family.
   
 0.903
A0A5C3N3H8
Uncharacterized protein.
  
 0.825
A0A5C3N6A3
2Fe-2S ferredoxin-type domain-containing protein.
  
 0.825
A0A5C3N707
Uncharacterized protein.
  
 0.825
A0A5C3NHN8
Rhodanese-like protein.
   
 0.823
A0A5C3NJU3
Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.
    
 
 0.807
Your Current Organism:
Heliocybe sulcata
NCBI taxonomy Id: 5364
Other names: H. sulcata, Lentinus sulcatus
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