STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A5C3N808Pectin lyase-like protein; Belongs to the glycosyl hydrolase 28 family. (424 aa)    
Predicted Functional Partners:
A0A5C3NBF1
Endo-polygalacturonase PG1.
     
 0.884
A0A5C3NL45
Glycoside hydrolase family 28 protein.
     
 0.884
A0A5C3MTN0
Glycoside hydrolase family 51 protein.
     
 0.731
A0A5C3MXV5
Glycoside hydrolase.
     
 0.731
A0A5C3NIT9
Glycoside hydrolase.
     
 0.731
A0A5C3N727
Isocitrate lyase.
   
  
 0.639
A0A5C3MXN3
Citrate synthase; Belongs to the citrate synthase family.
   
 
 0.630
A0A5C3N0V2
Citrate synthase; Belongs to the citrate synthase family.
   
 
 0.630
A0A5C3NF82
Citrate synthase; Belongs to the citrate synthase family.
   
 
 0.630
A0A5C3NF63
DNA polymerase epsilon subunit; Participates in DNA repair and in chromosomal DNA replication; Belongs to the DNA polymerase epsilon subunit B family.
   
   0.602
Your Current Organism:
Heliocybe sulcata
NCBI taxonomy Id: 5364
Other names: H. sulcata, Lentinus sulcatus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.