STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A5C3N8G3Oxidoreductase. (318 aa)    
Predicted Functional Partners:
A0A5C3MPS0
GPI-anchor transamidase; Mediates GPI anchoring in the endoplasmic reticulum, by replacing a protein's C-terminal GPI attachment signal peptide with a pre-assembled GPI. During this transamidation reaction, the GPI transamidase forms a carbonyl intermediate with the substrate protein. Belongs to the peptidase C13 family.
   
 
 0.938
A0A5C3N7F9
Serine palmitoyltransferase 2.
     
 0.934
A0A5C3NH31
Serine palmitoyltransferase.
     
 0.934
A0A5C3MVF2
Gpi16 subunit, GPI transamidase component.
     
 0.933
A0A5C3N2U6
Uncharacterized protein.
    
 0.933
A0A5C3NFD2
Mannosyltransferase.
   
 
 0.925
A0A5C3MV43
Sphingolipid delta(4)-desaturase; Delta(4)-fatty-acid desaturase which introduces a double bond at the 4-position in the long-chain base (LCB) of ceramides.
   
 
 0.912
A0A5C3MWP0
acidPPc domain-containing protein.
    
 0.910
A0A5C3N589
Sphingosine hydroxylase; Belongs to the sterol desaturase family.
    
 0.907
A0A5C3N007
Neutral ceramidase.
     
 0.905
Your Current Organism:
Heliocybe sulcata
NCBI taxonomy Id: 5364
Other names: H. sulcata, Lentinus sulcatus
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