Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
A0A5C3MV69 | A0A5C3MW61 | Serine hydroxymethyltransferase; Interconversion of serine and glycine. Belongs to the SHMT family. | FSH1 domain-containing protein. | 0.930 |
A0A5C3MV69 | A0A5C3MYI7 | Serine hydroxymethyltransferase; Interconversion of serine and glycine. Belongs to the SHMT family. | FSH1-domain-containing protein. | 0.930 |
A0A5C3MV69 | A0A5C3N4W6 | Serine hydroxymethyltransferase; Interconversion of serine and glycine. Belongs to the SHMT family. | Flavo protein. | 0.951 |
A0A5C3MV69 | A0A5C3N529 | Serine hydroxymethyltransferase; Interconversion of serine and glycine. Belongs to the SHMT family. | Thymidylate kinase. | 0.573 |
A0A5C3MV69 | A0A5C3N9U8 | Serine hydroxymethyltransferase; Interconversion of serine and glycine. Belongs to the SHMT family. | Thymidylate synthase. | 0.951 |
A0A5C3MV69 | A0A5C3NB44 | Serine hydroxymethyltransferase; Interconversion of serine and glycine. Belongs to the SHMT family. | FTHFS-domain-containing protein. | 0.977 |
A0A5C3MV69 | A0A5C3NI98 | Serine hydroxymethyltransferase; Interconversion of serine and glycine. Belongs to the SHMT family. | DHFR domain-containing protein; Belongs to the dihydrofolate reductase family. | 0.959 |
A0A5C3MW61 | A0A5C3MV69 | FSH1 domain-containing protein. | Serine hydroxymethyltransferase; Interconversion of serine and glycine. Belongs to the SHMT family. | 0.930 |
A0A5C3MW61 | A0A5C3MYI7 | FSH1 domain-containing protein. | FSH1-domain-containing protein. | 0.733 |
A0A5C3MW61 | A0A5C3N3H7 | FSH1 domain-containing protein. | Uncharacterized protein. | 0.497 |
A0A5C3MW61 | A0A5C3N4W6 | FSH1 domain-containing protein. | Flavo protein. | 0.981 |
A0A5C3MW61 | A0A5C3N529 | FSH1 domain-containing protein. | Thymidylate kinase. | 0.845 |
A0A5C3MW61 | A0A5C3N862 | FSH1 domain-containing protein. | Uncharacterized protein. | 0.497 |
A0A5C3MW61 | A0A5C3N9A0 | FSH1 domain-containing protein. | Uncharacterized protein. | 0.497 |
A0A5C3MW61 | A0A5C3N9U8 | FSH1 domain-containing protein. | Thymidylate synthase. | 0.981 |
A0A5C3MW61 | A0A5C3NB44 | FSH1 domain-containing protein. | FTHFS-domain-containing protein. | 0.926 |
A0A5C3MW61 | A0A5C3NI98 | FSH1 domain-containing protein. | DHFR domain-containing protein; Belongs to the dihydrofolate reductase family. | 0.977 |
A0A5C3MYI7 | A0A5C3MV69 | FSH1-domain-containing protein. | Serine hydroxymethyltransferase; Interconversion of serine and glycine. Belongs to the SHMT family. | 0.930 |
A0A5C3MYI7 | A0A5C3MW61 | FSH1-domain-containing protein. | FSH1 domain-containing protein. | 0.733 |
A0A5C3MYI7 | A0A5C3N3H7 | FSH1-domain-containing protein. | Uncharacterized protein. | 0.497 |
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