STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A5C3N9X8Isoleucine-tRNA ligase; Belongs to the class-I aminoacyl-tRNA synthetase family. (1077 aa)    
Predicted Functional Partners:
A0A5C3MQU7
Leucyl-tRNA synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
 0.995
A0A5C3MWP4
Prolyl-tRNA synthetase.
   
 0.995
A0A5C3NB72
Glutamate-tRNA ligase; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
 0.993
A0A5C3MRY8
Methionyl-tRNA synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
 0.989
A0A5C3N3C9
Tyrosine--tRNA ligase.
  
 0.989
A0A5C3NCN6
Glutamine-tRNA ligase; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
 0.981
A0A5C3MM37
Arginyl-tRNA synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
 0.972
A0A5C3N9B9
Nucleic acid-binding protein.
  
 0.971
A0A5C3N9K4
Lysine--tRNA ligase.
  
 0.970
A0A5C3N2B0
Uncharacterized protein; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
0.956
Your Current Organism:
Heliocybe sulcata
NCBI taxonomy Id: 5364
Other names: H. sulcata, Lentinus sulcatus
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