Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
A0A5C3MSM8 | A0A5C3N5P2 | Ribokinase-like protein. | Pyridoxamine 5'-phosphate oxidase. | 0.853 |
A0A5C3MSM8 | A0A5C3NA54 | Ribokinase-like protein. | 4-nitrophenylphosphatase. | 0.787 |
A0A5C3MUL3 | A0A5C3NA54 | Uncharacterized protein. | 4-nitrophenylphosphatase. | 0.638 |
A0A5C3MZ94 | A0A5C3NA54 | Alpha/beta-hydrolase. | 4-nitrophenylphosphatase. | 0.711 |
A0A5C3MZ94 | A0A5C3NCR7 | Alpha/beta-hydrolase. | Alpha/beta-hydrolase. | 0.752 |
A0A5C3MZ94 | A0A5C3NE48 | Alpha/beta-hydrolase. | Cyclin-dependent protein kinase inhibitor. | 0.766 |
A0A5C3MZ94 | A0A5C3NJF3 | Alpha/beta-hydrolase. | Alpha/beta-hydrolase. | 0.724 |
A0A5C3N5P2 | A0A5C3MSM8 | Pyridoxamine 5'-phosphate oxidase. | Ribokinase-like protein. | 0.853 |
A0A5C3N5P2 | A0A5C3NA54 | Pyridoxamine 5'-phosphate oxidase. | 4-nitrophenylphosphatase. | 0.794 |
A0A5C3NA54 | A0A5C3MSM8 | 4-nitrophenylphosphatase. | Ribokinase-like protein. | 0.787 |
A0A5C3NA54 | A0A5C3MUL3 | 4-nitrophenylphosphatase. | Uncharacterized protein. | 0.638 |
A0A5C3NA54 | A0A5C3MZ94 | 4-nitrophenylphosphatase. | Alpha/beta-hydrolase. | 0.711 |
A0A5C3NA54 | A0A5C3N5P2 | 4-nitrophenylphosphatase. | Pyridoxamine 5'-phosphate oxidase. | 0.794 |
A0A5C3NA54 | A0A5C3NBH0 | 4-nitrophenylphosphatase. | DNA primase large subunit; DNA primase is the polymerase that synthesizes small RNA primers for the Okazaki fragments made during discontinuous DNA replication; Belongs to the eukaryotic-type primase large subunit family. | 0.809 |
A0A5C3NA54 | A0A5C3NC92 | 4-nitrophenylphosphatase. | NAD(P)-binding protein; Belongs to the short-chain dehydrogenases/reductases (SDR) family. | 0.703 |
A0A5C3NA54 | A0A5C3NCR7 | 4-nitrophenylphosphatase. | Alpha/beta-hydrolase. | 0.711 |
A0A5C3NA54 | A0A5C3NE48 | 4-nitrophenylphosphatase. | Cyclin-dependent protein kinase inhibitor. | 0.691 |
A0A5C3NA54 | A0A5C3NJF3 | 4-nitrophenylphosphatase. | Alpha/beta-hydrolase. | 0.711 |
A0A5C3NA54 | A0A5C3NMA2 | 4-nitrophenylphosphatase. | Glycerol dehydrogenase. | 0.742 |
A0A5C3NBH0 | A0A5C3NA54 | DNA primase large subunit; DNA primase is the polymerase that synthesizes small RNA primers for the Okazaki fragments made during discontinuous DNA replication; Belongs to the eukaryotic-type primase large subunit family. | 4-nitrophenylphosphatase. | 0.809 |
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