STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A5C3NAC0WD40 repeat-like protein. (637 aa)    
Predicted Functional Partners:
A0A5C3N9M0
RING/U-box.
    
 0.955
A0A5C3MWT0
Uncharacterized protein.
    
 0.932
A0A5C3NCP3
E3 ubiquitin ligase SCF complex, Skp subunit; Belongs to the SKP1 family.
    
 0.932
A0A5C3N259
Cullin-domain-containing protein; Belongs to the cullin family.
    
 0.927
A0A5C3N3S6
Cullin-domain-containing protein; Belongs to the cullin family.
    
 0.927
A0A5C3N505
Kinase-like protein.
    
 0.895
A0A5C3NKC0
Uncharacterized protein.
    
 0.882
A0A5C3MQ52
Ubiquitin.
    
 0.879
A0A5C3NE92
CMGC/GSK protein kinase; Belongs to the protein kinase superfamily.
    
 0.879
A0A5C3MZ33
Ubiquitin-conjugating enzyme E2; Belongs to the ubiquitin-conjugating enzyme family.
    
 0.869
Your Current Organism:
Heliocybe sulcata
NCBI taxonomy Id: 5364
Other names: H. sulcata, Lentinus sulcatus
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