STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A5C3NAF4C2H2-type domain-containing protein. (291 aa)    
Predicted Functional Partners:
A0A5C3N2J5
Nitrate reductase; Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria.
    
 0.729
A0A5C3N2J4
TPR-like protein.
    
 0.615
A0A5C3NF83
Uncharacterized protein.
    
 0.603
A0A5C3NI58
Translational machinery component.
    
  0.595
A0A5C3NDE1
RNA polymerase III subunit C3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
    
 0.593
A0A5C3N6I2
RuvB-like helicase; DNA helicase participates in several chromatin remodeling complexes, including the SWR1 and the INO80 complexes.
    
  0.592
A0A5C3N830
Uncharacterized protein.
    
  0.587
A0A5C3NA75
Uncharacterized protein; Belongs to the universal ribosomal protein uS9 family.
    
  0.587
A0A5C3NEV8
Uncharacterized protein.
    
 0.587
A0A5C3NGR5
Ribosomal protein S2.
   
  0.587
Your Current Organism:
Heliocybe sulcata
NCBI taxonomy Id: 5364
Other names: H. sulcata, Lentinus sulcatus
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