STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A5C3NB57tRNA guanosine-2'-O-methyltransferase. (462 aa)    
Predicted Functional Partners:
A0A5C3N0V6
Trm112p-domain-containing protein.
   
 0.979
A0A5C3NAP0
40S ribosomal protein S8; Belongs to the eukaryotic ribosomal protein eS8 family.
 
      0.867
A0A5C3N698
SIR2-domain-containing protein.
    
 0.837
A0A5C3NB79
Utp21-domain-containing protein.
   
    0.830
A0A5C3NSW7
ARM repeat-containing protein.
   
    0.792
A0A5C3MKH3
Brix-domain-containing protein.
   
    0.781
YTM1
Ribosome biogenesis protein YTM1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.
   
   0.770
A0A5C3NCP2
18S rRNA biogenesis protein.
   
    0.734
A0A5C3N6L5
tRNA (adenine(58)-N(1))-methyltransferase catalytic subunit TRM61; Catalytic subunit of tRNA (adenine-N(1)-)-methyltransferase, which catalyzes the formation of N(1)-methyladenine at position 58 (m1A58) in initiator methionyl-tRNA.
   
  
 0.733
A0A5C3NFT3
Brix-domain-containing protein.
   
    0.732
Your Current Organism:
Heliocybe sulcata
NCBI taxonomy Id: 5364
Other names: H. sulcata, Lentinus sulcatus
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