STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A5C3NCY6Vitamin B6 biosynthesis protein; Belongs to the PdxS/SNZ family. (335 aa)    
Predicted Functional Partners:
A0A5C3N6C2
SNO glutamine amidotransferase.
 0.999
A0A5C3NCJ5
Uncharacterized protein.
     
 0.926
A0A5C3MSM8
Ribokinase-like protein.
   
 0.914
A0A5C3N0R6
NMT-1 like protein.
    
 0.805
A0A5C3N5P2
Pyridoxamine 5'-phosphate oxidase.
    
 0.785
A0A5C3N132
PHP domain-like protein.
    
 0.766
A0A5C3MYZ2
POP4 domain-containing protein.
     
 0.745
A0A5C3N633
POP1-domain-containing protein.
     
 0.745
A0A5C3MRJ3
Aldolase.
    
 0.744
A0A5C3MTU4
Glyceraldehyde-3-phosphate dehydrogenase.
 
  
 0.744
Your Current Organism:
Heliocybe sulcata
NCBI taxonomy Id: 5364
Other names: H. sulcata, Lentinus sulcatus
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