STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A5C3NDD3H/ACA ribonucleoprotein complex subunit; Required for ribosome biogenesis. Part of a complex which catalyzes pseudouridylation of rRNA. This involves the isomerization of uridine such that the ribose is subsequently attached to C5, instead of the normal N1. Pseudouridine ("psi") residues may serve to stabilize the conformation of rRNAs. (130 aa)    
Predicted Functional Partners:
A0A5C3NIQ0
Putative rRNA pseudouridine synthase.
   
 0.999
A0A5C3NPV2
Ribonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family.
   
 0.999
A0A5C3NGB4
Nop10 family nucleolar RNA-binding protein.
   
 0.998
A0A5C3NBC9
Pseudouridine synthase.
   
 0.987
A0A5C3MPF8
Fibrillarin.
   
 
 0.980
A0A5C3N2Z5
WD40 repeat-like protein.
    
 0.974
A0A5C3NCL8
Ribonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family.
   
 0.961
A0A5C3NFI2
SHQ1-domain-containing protein.
   
 
 0.948
A0A5C3NR65
Nop domain-containing protein.
  
 
 0.944
A0A5C3MQD8
40S ribosomal protein S12; Belongs to the eukaryotic ribosomal protein eS12 family.
   
 0.929
Your Current Organism:
Heliocybe sulcata
NCBI taxonomy Id: 5364
Other names: H. sulcata, Lentinus sulcatus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.