Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
A0A5C3MKH3 | A0A5C3MRP4 | A0A5C3MKH3 | A0A5C3MRP4 | Brix-domain-containing protein. | RRM domain-containing protein. | 0.982 |
A0A5C3MKH3 | A0A5C3MTB7 | A0A5C3MKH3 | A0A5C3MTB7 | Brix-domain-containing protein. | Ribosomal protein L1. | 0.994 |
A0A5C3MKH3 | A0A5C3MTE3 | A0A5C3MKH3 | A0A5C3MTE3 | Brix-domain-containing protein. | RNA-binding domain-containing protein. | 0.982 |
A0A5C3MKH3 | A0A5C3N498 | A0A5C3MKH3 | A0A5C3N498 | Brix-domain-containing protein. | Ribosome assembly factor mrt4; Component of the ribosome assembly machinery. Nuclear paralog of the ribosomal protein P0, it binds pre-60S subunits at an early stage of assembly in the nucleolus, and is replaced by P0 in cytoplasmic pre-60S subunits and mature 80S ribosomes. | 0.994 |
A0A5C3MKH3 | A0A5C3N4H8 | A0A5C3MKH3 | A0A5C3N4H8 | Brix-domain-containing protein. | Ebp2-domain-containing protein. | 0.995 |
A0A5C3MKH3 | A0A5C3N8V0 | A0A5C3MKH3 | A0A5C3N8V0 | Brix-domain-containing protein. | Nucleolar GTP-binding protein 1; Involved in the biogenesis of the 60S ribosomal subunit. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family. NOG subfamily. | 0.996 |
A0A5C3MKH3 | A0A5C3NE35 | A0A5C3MKH3 | A0A5C3NE35 | Brix-domain-containing protein. | Ribosome biogenesis regulatory protein; Involved in ribosomal large subunit assembly. Belongs to the RRS1 family. | 0.999 |
A0A5C3MKH3 | A0A5C3NFM4 | A0A5C3MKH3 | A0A5C3NFM4 | Brix-domain-containing protein. | TRASH domain-containing protein. | 0.995 |
A0A5C3MKH3 | A0A5C3NHN7 | A0A5C3MKH3 | A0A5C3NHN7 | Brix-domain-containing protein. | Nucleolar GTP-binding protein 2; GTPase that associates with pre-60S ribosomal subunits in the nucleolus and is required for their nuclear export and maturation. Belongs to the TRAFAC class YlqF/YawG GTPase family. NOG2 subfamily. | 0.994 |
A0A5C3MKH3 | NOP7 | A0A5C3MKH3 | A0A5C3NUC4 | Brix-domain-containing protein. | Pescadillo homolog; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome. | 0.991 |
A0A5C3MRP4 | A0A5C3MKH3 | A0A5C3MRP4 | A0A5C3MKH3 | RRM domain-containing protein. | Brix-domain-containing protein. | 0.982 |
A0A5C3MRP4 | A0A5C3MTB7 | A0A5C3MRP4 | A0A5C3MTB7 | RRM domain-containing protein. | Ribosomal protein L1. | 0.984 |
A0A5C3MRP4 | A0A5C3N498 | A0A5C3MRP4 | A0A5C3N498 | RRM domain-containing protein. | Ribosome assembly factor mrt4; Component of the ribosome assembly machinery. Nuclear paralog of the ribosomal protein P0, it binds pre-60S subunits at an early stage of assembly in the nucleolus, and is replaced by P0 in cytoplasmic pre-60S subunits and mature 80S ribosomes. | 0.980 |
A0A5C3MRP4 | A0A5C3N4H8 | A0A5C3MRP4 | A0A5C3N4H8 | RRM domain-containing protein. | Ebp2-domain-containing protein. | 0.983 |
A0A5C3MRP4 | A0A5C3N8V0 | A0A5C3MRP4 | A0A5C3N8V0 | RRM domain-containing protein. | Nucleolar GTP-binding protein 1; Involved in the biogenesis of the 60S ribosomal subunit. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family. NOG subfamily. | 0.975 |
A0A5C3MRP4 | A0A5C3NE35 | A0A5C3MRP4 | A0A5C3NE35 | RRM domain-containing protein. | Ribosome biogenesis regulatory protein; Involved in ribosomal large subunit assembly. Belongs to the RRS1 family. | 0.977 |
A0A5C3MRP4 | A0A5C3NFM4 | A0A5C3MRP4 | A0A5C3NFM4 | RRM domain-containing protein. | TRASH domain-containing protein. | 0.980 |
A0A5C3MRP4 | A0A5C3NHN7 | A0A5C3MRP4 | A0A5C3NHN7 | RRM domain-containing protein. | Nucleolar GTP-binding protein 2; GTPase that associates with pre-60S ribosomal subunits in the nucleolus and is required for their nuclear export and maturation. Belongs to the TRAFAC class YlqF/YawG GTPase family. NOG2 subfamily. | 0.971 |
A0A5C3MRP4 | NOP7 | A0A5C3MRP4 | A0A5C3NUC4 | RRM domain-containing protein. | Pescadillo homolog; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome. | 0.980 |
A0A5C3MTB7 | A0A5C3MKH3 | A0A5C3MTB7 | A0A5C3MKH3 | Ribosomal protein L1. | Brix-domain-containing protein. | 0.994 |
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