STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A5C3NEL7Cystathionine gamma-synthase. (404 aa)    
Predicted Functional Partners:
A0A5C3N219
PALP-domain-containing protein.
 
 0.967
A0A5C3NB76
PALP-domain-containing protein.
 
 0.945
A0A5C3NJB1
Pyridoxal phosphate-dependent enzyme, beta subunit.
 
 0.945
A0A5C3NHK9
Cobalamin-independent methionine synthase.
  
 
 0.942
A0A5C3NLS3
Homocysteine S-methyltransferase.
  
 
 0.937
A0A5C3N598
PLP-dependent transferase.
   
 
 0.936
A0A5C3MRF6
Branched-chain-amino-acid aminotransferase; Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family.
   
 0.902
A0A5C3NKK1
Branched-chain-amino-acid aminotransferase; Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family.
   
 0.902
A0A5C3N1K1
Adenosylhomocysteinase.
  
 0.898
A0A5C3NDB0
Assimilatory sulfite reductase.
   
 
 0.891
Your Current Organism:
Heliocybe sulcata
NCBI taxonomy Id: 5364
Other names: H. sulcata, Lentinus sulcatus
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