Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
A0A5C3MMV7 | A0A5C3MT08 | Small nuclear ribonucleoprotein Sm D1; Involved in pre-mRNA splicing. Binds snRNA U1, U2, U4 and U5 which contain a highly conserved structural motif called the Sm binding site; Belongs to the snRNP core protein family. | Uncharacterized protein. | 0.956 |
A0A5C3MMV7 | A0A5C3NDC2 | Small nuclear ribonucleoprotein Sm D1; Involved in pre-mRNA splicing. Binds snRNA U1, U2, U4 and U5 which contain a highly conserved structural motif called the Sm binding site; Belongs to the snRNP core protein family. | Small nuclear ribonucleoprotein Sm D3. | 0.999 |
A0A5C3MMV7 | A0A5C3NEQ4 | Small nuclear ribonucleoprotein Sm D1; Involved in pre-mRNA splicing. Binds snRNA U1, U2, U4 and U5 which contain a highly conserved structural motif called the Sm binding site; Belongs to the snRNP core protein family. | DUF537-domain-containing protein. | 0.537 |
A0A5C3MMV7 | A0A5C3NHX5 | Small nuclear ribonucleoprotein Sm D1; Involved in pre-mRNA splicing. Binds snRNA U1, U2, U4 and U5 which contain a highly conserved structural motif called the Sm binding site; Belongs to the snRNP core protein family. | Small nuclear ribonucleo protein SmF. | 0.999 |
A0A5C3MMV7 | A0A5C3NJE9 | Small nuclear ribonucleoprotein Sm D1; Involved in pre-mRNA splicing. Binds snRNA U1, U2, U4 and U5 which contain a highly conserved structural motif called the Sm binding site; Belongs to the snRNP core protein family. | Small nuclear ribonucleoprotein Sm D2. | 0.999 |
A0A5C3MMV7 | A0A5C3NM91 | Small nuclear ribonucleoprotein Sm D1; Involved in pre-mRNA splicing. Binds snRNA U1, U2, U4 and U5 which contain a highly conserved structural motif called the Sm binding site; Belongs to the snRNP core protein family. | Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family. | 0.999 |
A0A5C3MRF5 | A0A5C3N5G0 | ERCC4 domain-containing protein. | DNA polymerase. | 0.724 |
A0A5C3MRF5 | A0A5C3NEQ4 | ERCC4 domain-containing protein. | DUF537-domain-containing protein. | 0.601 |
A0A5C3MT08 | A0A5C3MMV7 | Uncharacterized protein. | Small nuclear ribonucleoprotein Sm D1; Involved in pre-mRNA splicing. Binds snRNA U1, U2, U4 and U5 which contain a highly conserved structural motif called the Sm binding site; Belongs to the snRNP core protein family. | 0.956 |
A0A5C3MT08 | A0A5C3NDC2 | Uncharacterized protein. | Small nuclear ribonucleoprotein Sm D3. | 0.861 |
A0A5C3MT08 | A0A5C3NEQ4 | Uncharacterized protein. | DUF537-domain-containing protein. | 0.612 |
A0A5C3MT08 | A0A5C3NHX5 | Uncharacterized protein. | Small nuclear ribonucleo protein SmF. | 0.953 |
A0A5C3MT08 | A0A5C3NJE9 | Uncharacterized protein. | Small nuclear ribonucleoprotein Sm D2. | 0.976 |
A0A5C3MT08 | A0A5C3NM91 | Uncharacterized protein. | Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family. | 0.967 |
A0A5C3N5G0 | A0A5C3MRF5 | DNA polymerase. | ERCC4 domain-containing protein. | 0.724 |
A0A5C3N5G0 | A0A5C3NEQ4 | DNA polymerase. | DUF537-domain-containing protein. | 0.603 |
A0A5C3N5G0 | A0A5C3NNR7 | DNA polymerase. | Uncharacterized protein. | 0.999 |
A0A5C3NDC2 | A0A5C3MMV7 | Small nuclear ribonucleoprotein Sm D3. | Small nuclear ribonucleoprotein Sm D1; Involved in pre-mRNA splicing. Binds snRNA U1, U2, U4 and U5 which contain a highly conserved structural motif called the Sm binding site; Belongs to the snRNP core protein family. | 0.999 |
A0A5C3NDC2 | A0A5C3MT08 | Small nuclear ribonucleoprotein Sm D3. | Uncharacterized protein. | 0.861 |
A0A5C3NDC2 | A0A5C3NEQ4 | Small nuclear ribonucleoprotein Sm D3. | DUF537-domain-containing protein. | 0.542 |
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