STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A5C3NL53Phytanoyl-CoA dioxygenase. (308 aa)    
Predicted Functional Partners:
A0A5C3MUP8
WD40 repeat-like protein.
    
 0.849
A0A5C3N204
PLP-dependent transferase.
    
 0.729
A0A5C3NKY5
RING-type domain-containing protein.
   
 
 0.722
A0A5C3NBY1
TPR-like protein.
    
 0.716
A0A5C3NCM2
TPR-like protein.
    
 0.716
A0A5C3NKZ9
SH3 domain-containing protein.
     
 0.689
A0A5C3MWK8
Ubiquitin-40S ribosomal protein S31 fusion protein.
    
  0.677
A0A5C3NF10
Thiolase; Belongs to the thiolase-like superfamily. Thiolase family.
   
 
 0.652
A0A5C3NI08
Heparinase II/III family protein.
   
 
 0.652
A0A5C3NIN5
3-ketoacyl-CoA thiolase; Belongs to the thiolase-like superfamily. Thiolase family.
   
 
 0.652
Your Current Organism:
Heliocybe sulcata
NCBI taxonomy Id: 5364
Other names: H. sulcata, Lentinus sulcatus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.