STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SIN70866.1Uncharacterized zinc-type alcohol dehydrogenase-like protein. (346 aa)    
Predicted Functional Partners:
SIO46832.1
Alcohol dehydrogenase, class IV.
  
 0.966
SIN70855.1
Helix-turn-helix domain-containing protein.
       0.768
SIO42406.1
ring-1,2-phenylacetyl-CoA epoxidase subunit PaaE.
  
 
  0.667
SIO43142.1
Aldehyde dehydrogenase (NAD+); Belongs to the aldehyde dehydrogenase family.
  
 
 0.656
SIN70845.1
DNA-binding response regulator, OmpR family, contains REC and winged-helix (wHTH) domain.
       0.653
SIN81162.1
Quinoprotein glucose dehydrogenase.
   
 
 0.642
SIO52025.1
3-hydroxyacyl-CoA dehydrogenase.
  
 
 0.642
SIO52385.1
Rhamnulose-1-phosphate aldolase/alcohol dehydrogenase.
   
  0.625
SIO54482.1
Cytochrome c oxidase cbb3-type subunit I/II; Belongs to the heme-copper respiratory oxidase family.
  
  
 0.604
SIN82140.1
Aldehyde dehydrogenase (NAD+); Belongs to the aldehyde dehydrogenase family.
  
 
 0.595
Your Current Organism:
Chitinophaga niabensis
NCBI taxonomy Id: 536979
Other names: C. niabensis, Chitinophaga niabensis Weon et al. 2009 emend. Proenca et al. 2014, Chitinophaga sp. JS13-10, DSM 24787, JCM 15440, KACC 12952, strain JS13-10
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