Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SIN66669.1 | SIN96168.1 | SAMN04488055_0393 | SAMN04488055_2288 | TonB-linked outer membrane protein, SusC/RagA family. | Starch-binding associating with outer membrane. | 0.672 |
SIN75532.1 | SIN96168.1 | SAMN04488055_1157 | SAMN04488055_2288 | TonB-linked outer membrane protein, SusC/RagA family. | Starch-binding associating with outer membrane. | 0.723 |
SIN83947.1 | SIN96168.1 | SAMN04488055_1699 | SAMN04488055_2288 | TonB-linked outer membrane protein, SusC/RagA family. | Starch-binding associating with outer membrane. | 0.758 |
SIN96150.1 | SIN96168.1 | SAMN04488055_2287 | SAMN04488055_2288 | O-Glycosyl hydrolase. | Starch-binding associating with outer membrane. | 0.832 |
SIN96150.1 | SIN96191.1 | SAMN04488055_2287 | SAMN04488055_2289 | O-Glycosyl hydrolase. | TonB-linked outer membrane protein, SusC/RagA family. | 0.787 |
SIN96150.1 | SIN96211.1 | SAMN04488055_2287 | SAMN04488055_2290 | O-Glycosyl hydrolase. | Two component regulator propeller. | 0.611 |
SIN96168.1 | SIN66669.1 | SAMN04488055_2288 | SAMN04488055_0393 | Starch-binding associating with outer membrane. | TonB-linked outer membrane protein, SusC/RagA family. | 0.672 |
SIN96168.1 | SIN75532.1 | SAMN04488055_2288 | SAMN04488055_1157 | Starch-binding associating with outer membrane. | TonB-linked outer membrane protein, SusC/RagA family. | 0.723 |
SIN96168.1 | SIN83947.1 | SAMN04488055_2288 | SAMN04488055_1699 | Starch-binding associating with outer membrane. | TonB-linked outer membrane protein, SusC/RagA family. | 0.758 |
SIN96168.1 | SIN96150.1 | SAMN04488055_2288 | SAMN04488055_2287 | Starch-binding associating with outer membrane. | O-Glycosyl hydrolase. | 0.832 |
SIN96168.1 | SIN96191.1 | SAMN04488055_2288 | SAMN04488055_2289 | Starch-binding associating with outer membrane. | TonB-linked outer membrane protein, SusC/RagA family. | 0.948 |
SIN96168.1 | SIN96211.1 | SAMN04488055_2288 | SAMN04488055_2290 | Starch-binding associating with outer membrane. | Two component regulator propeller. | 0.687 |
SIN96168.1 | SIO10076.1 | SAMN04488055_2288 | SAMN04488055_2926 | Starch-binding associating with outer membrane. | TonB-linked outer membrane protein, SusC/RagA family. | 0.655 |
SIN96168.1 | SIO37859.1 | SAMN04488055_2288 | SAMN04488055_3524 | Starch-binding associating with outer membrane. | TonB-linked outer membrane protein, SusC/RagA family. | 0.656 |
SIN96168.1 | SIO52180.1 | SAMN04488055_2288 | SAMN04488055_5183 | Starch-binding associating with outer membrane. | TonB-linked outer membrane protein, SusC/RagA family. | 0.683 |
SIN96168.1 | SIO54772.1 | SAMN04488055_2288 | SAMN04488055_5664 | Starch-binding associating with outer membrane. | TonB-linked outer membrane protein, SusC/RagA family. | 0.748 |
SIN96191.1 | SIN96150.1 | SAMN04488055_2289 | SAMN04488055_2287 | TonB-linked outer membrane protein, SusC/RagA family. | O-Glycosyl hydrolase. | 0.787 |
SIN96191.1 | SIN96168.1 | SAMN04488055_2289 | SAMN04488055_2288 | TonB-linked outer membrane protein, SusC/RagA family. | Starch-binding associating with outer membrane. | 0.948 |
SIN96191.1 | SIN96211.1 | SAMN04488055_2289 | SAMN04488055_2290 | TonB-linked outer membrane protein, SusC/RagA family. | Two component regulator propeller. | 0.660 |
SIN96211.1 | SIN96150.1 | SAMN04488055_2290 | SAMN04488055_2287 | Two component regulator propeller. | O-Glycosyl hydrolase. | 0.611 |
page 1 of 2