Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SIO05382.1 | SIO05408.1 | SAMN04488055_2706 | SAMN04488055_2707 | Dipeptidyl aminopeptidase/acylaminoacyl peptidase. | Hypothetical protein. | 0.773 |
SIO05382.1 | SIO05430.1 | SAMN04488055_2706 | SAMN04488055_2708 | Dipeptidyl aminopeptidase/acylaminoacyl peptidase. | RNA polymerase sigma-70 factor, ECF subfamily. | 0.558 |
SIO05382.1 | SIO05450.1 | SAMN04488055_2706 | SAMN04488055_2709 | Dipeptidyl aminopeptidase/acylaminoacyl peptidase. | Ferric-dicitrate binding protein FerR, regulates iron transport through sigma-19. | 0.426 |
SIO05408.1 | SIO05382.1 | SAMN04488055_2707 | SAMN04488055_2706 | Hypothetical protein. | Dipeptidyl aminopeptidase/acylaminoacyl peptidase. | 0.773 |
SIO05408.1 | SIO05430.1 | SAMN04488055_2707 | SAMN04488055_2708 | Hypothetical protein. | RNA polymerase sigma-70 factor, ECF subfamily. | 0.558 |
SIO05408.1 | SIO05450.1 | SAMN04488055_2707 | SAMN04488055_2709 | Hypothetical protein. | Ferric-dicitrate binding protein FerR, regulates iron transport through sigma-19. | 0.426 |
SIO05430.1 | SIO05382.1 | SAMN04488055_2708 | SAMN04488055_2706 | RNA polymerase sigma-70 factor, ECF subfamily. | Dipeptidyl aminopeptidase/acylaminoacyl peptidase. | 0.558 |
SIO05430.1 | SIO05408.1 | SAMN04488055_2708 | SAMN04488055_2707 | RNA polymerase sigma-70 factor, ECF subfamily. | Hypothetical protein. | 0.558 |
SIO05430.1 | SIO05450.1 | SAMN04488055_2708 | SAMN04488055_2709 | RNA polymerase sigma-70 factor, ECF subfamily. | Ferric-dicitrate binding protein FerR, regulates iron transport through sigma-19. | 0.707 |
SIO05450.1 | SIO05382.1 | SAMN04488055_2709 | SAMN04488055_2706 | Ferric-dicitrate binding protein FerR, regulates iron transport through sigma-19. | Dipeptidyl aminopeptidase/acylaminoacyl peptidase. | 0.426 |
SIO05450.1 | SIO05408.1 | SAMN04488055_2709 | SAMN04488055_2707 | Ferric-dicitrate binding protein FerR, regulates iron transport through sigma-19. | Hypothetical protein. | 0.426 |
SIO05450.1 | SIO05430.1 | SAMN04488055_2709 | SAMN04488055_2708 | Ferric-dicitrate binding protein FerR, regulates iron transport through sigma-19. | RNA polymerase sigma-70 factor, ECF subfamily. | 0.707 |