STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SIO37343.1Phytoene dehydrogenase-related protein. (475 aa)    
Predicted Functional Partners:
SIO37303.1
Hypothetical protein.
 
     0.837
SIO37291.1
Hypothetical protein.
 
     0.832
SIO37316.1
Cytochrome c.
       0.797
SIO37329.1
Sulfane dehydrogenase subunit SoxC.
       0.797
SIO37354.1
Putative acetyltransferase.
       0.737
SIO37281.1
SusD family protein.
 
     0.736
SIO37268.1
TonB-linked outer membrane protein, SusC/RagA family.
       0.699
SIO45863.1
Protein of unknown function.
    
 0.522
SIO07895.1
1-acyl-sn-glycerol-3-phosphate acyltransferases.
  
 
 0.499
SIN72975.1
Magnesium chelatase subunit I.
  
 
 0.485
Your Current Organism:
Chitinophaga niabensis
NCBI taxonomy Id: 536979
Other names: C. niabensis, Chitinophaga niabensis Weon et al. 2009 emend. Proenca et al. 2014, Chitinophaga sp. JS13-10, DSM 24787, JCM 15440, KACC 12952, strain JS13-10
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