STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SIO47215.1Two-component system, OmpR family, alkaline phosphatase synthesis response regulator PhoP. (236 aa)    
Predicted Functional Partners:
SIO46022.1
Signal transduction histidine kinase; Non-canonical start codon; manually curated.
 
 0.995
SIN77117.1
Signal transduction histidine kinase.
 
 0.992
SIO47707.1
PAS fold.
 
0.991
SIN99743.1
PAS domain S-box-containing protein.
 
0.989
SIO10200.1
Signal transduction histidine kinase.
 0.985
SIO42159.1
Signal transduction histidine kinase.
 
 0.984
SIO40640.1
Two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR.
  0.982
SIO47223.1
His Kinase A (phospho-acceptor) domain-containing protein.
  0.981
SIO01252.1
Signal transduction histidine kinase.
  
0.974
SIN65733.1
PAS domain S-box-containing protein.
 
0.972
Your Current Organism:
Chitinophaga niabensis
NCBI taxonomy Id: 536979
Other names: C. niabensis, Chitinophaga niabensis Weon et al. 2009 emend. Proenca et al. 2014, Chitinophaga sp. JS13-10, DSM 24787, JCM 15440, KACC 12952, strain JS13-10
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.