STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEC98576.1Efflux ABC transporter, permease protein; KEGG: cch:Cag_0337 1.3e-06 ATPase K06020; Psort location: CytoplasmicMembrane, score: 10.00. (776 aa)    
Predicted Functional Partners:
EEC98575.1
Putative bacteriocin export ABC transporter, lactococcin 972 group; KEGG: fal:FRAAL6466 1.0e-51 ABC-type transport systems, involved in lipoprotein release, ATPase components K06020; Psort location: CytoplasmicMembrane, score: 7.88.
 
  0.942
EEC97582.1
Putative bacteriocin export ABC transporter, lactococcin 972 group; KEGG: fal:FRAAL6466 6.4e-50 ABC-type transport systems, involved in lipoprotein release, ATPase components K06020; Psort location: CytoplasmicMembrane, score: 7.88.
 
  0.883
EEC94393.1
Putative bacteriocin export ABC transporter, lactococcin 972 group; KEGG: cch:Cag_0337 4.4e-51 ATPase K06020; Psort location: CytoplasmicMembrane, score: 7.88.
 
  0.879
EEC95650.1
Putative bacteriocin export ABC transporter, lactococcin 972 group; KEGG: fal:FRAAL6466 4.7e-54 ABC-type transport systems, involved in lipoprotein release, ATPase components K06020; Psort location: CytoplasmicMembrane, score: 7.88.
 
  0.868
EEC95707.1
ABC transporter, ATP-binding protein; KEGG: cch:Cag_0988 3.4e-51 ATPase K02003; Psort location: CytoplasmicMembrane, score: 7.88.
 
  0.865
EEC98577.1
KEGG: pen:PSEEN3665 0.0024 efflux ABC transporter, ATP-binding/permease protein; Psort location: CytoplasmicMembrane, score: 10.00.
 
   
0.813
EEC97346.1
Efflux transporter, RND family, MFP subunit.
 
   0.797
EEC94385.1
Efflux transporter, RND family, MFP subunit; KEGG: dme:Dmel_CG14217 0.0088 Tao-1 K04429; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
   0.789
EEC96719.1
ABC transporter, ATP-binding protein; KEGG: cch:Cag_0988 4.3e-53 ATPase K02003; Psort location: CytoplasmicMembrane, score: 7.88.
 
  0.771
EEC97357.1
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein; KEGG: ccr:CC1742 2.0e-26 ntrY; nitrogen regulation protein NtrY; Psort location: CytoplasmicMembrane, score: 7.88.
 
    0.769
Your Current Organism:
Parabacteroides johnsonii
NCBI taxonomy Id: 537006
Other names: P. johnsonii DSM 18315, Parabacteroides johnsonii DSM 18315, Parabacteroides johnsonii JCM 13406, Parabacteroides johnsonii M-165, Parabacteroides johnsonii str. DSM 18315, Parabacteroides johnsonii strain DSM 18315
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