STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEC98086.1Hypothetical protein. (279 aa)    
Predicted Functional Partners:
EEC98087.1
Tetratricopeptide repeat protein; KEGG: rno:26295 2.6e-10 Ogt; O-linked N-acetylglucosamine (GlcNAc) transferase (UDP-N-acetylglucosamine:polypeptide-N-acetylglucosaminyl transferase) K00754.
 
  
 0.911
EEC98085.1
Peptidase, M23 family; KEGG: ava:Ava_0183 2.2e-12 peptidase M23B K08259.
 
     0.818
EEC95559.1
Outer membrane lipoprotein carrier protein LolA.
  
 
 
 0.815
EEC95914.1
OmpA family protein; KEGG: bxe:Bxe_A4171 0.00015 putative cytochrome c oxidase K00403; Psort location: OuterMembrane, score: 9.92.
 
 
 0.789
EEC94626.1
Hypothetical protein.
 
    0.763
EEC97627.1
OmpA family protein.
  
 
 0.761
EEC94627.1
BNR/Asp-box repeat protein.
  
   
 0.755
EEC95609.1
Hypothetical protein.
  
     0.747
EEC97889.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 10.00.
  
     0.725
gldN
Gliding motility-associated protein GldN.
  
     0.724
Your Current Organism:
Parabacteroides johnsonii
NCBI taxonomy Id: 537006
Other names: P. johnsonii DSM 18315, Parabacteroides johnsonii DSM 18315, Parabacteroides johnsonii JCM 13406, Parabacteroides johnsonii M-165, Parabacteroides johnsonii str. DSM 18315, Parabacteroides johnsonii strain DSM 18315
Server load: medium (48%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.