STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEC98044.1Tetratricopeptide repeat protein; KEGG: eci:UTI89_C2868 2.2e-214 yphG; hypothetical protein YphG K00754; Psort location: Cytoplasmic, score: 8.96. (1099 aa)    
Predicted Functional Partners:
EEC98043.1
Glycosyl hydrolase family 2, sugar binding domain protein; KEGG: aba:Acid345_0579 3.6e-19 beta-glucuronidase K01195; Belongs to the glycosyl hydrolase 2 family.
 
     0.899
ribB
3,4-dihydroxy-2-butanone-4-phosphate synthase; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; In the C-terminal section; belongs to the GTP cyclohydrolase II family.
    
  0.878
EEC98047.1
KEGG: bcz:BCZK3497 2.9e-10 adaA; transcriptional regulator, AraC family K00567.
 
     0.852
EEC98045.1
MFS transporter, SP family; KEGG: cal:orf19.3526 4.3e-44 ITR2; myo-inositol transporter K08140; Psort location: CytoplasmicMembrane, score: 10.00; Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family.
 
     0.841
ndk
Putative nucleoside diphosphate kinase; Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate; Belongs to the NDK family.
    
  0.727
pyk
Pyruvate kinase; KEGG: bth:BT2841 2.0e-172 pyruvate kinase K00873; Psort location: Cytoplasmic, score: 8.96.
    
  0.703
EEC97958.1
Glycosyl hydrolase family 2, sugar binding domain protein; KEGG: sma:SAV1760 7.1e-19 bga4; putative beta-galactosidase K01190.
 
     0.694
EEC98136.1
Glycosyl hydrolase family 2, sugar binding domain protein; KEGG: sus:Acid_4607 3.8e-15 beta-galactosidase K01190; Belongs to the glycosyl hydrolase 2 family.
 
     0.655
EEC98428.1
Hypothetical protein.
 
  
  0.647
folE
GTP cyclohydrolase I; KEGG: bth:BT3931 3.4e-76 GTP cyclohydrolase I K01495; Psort location: Cytoplasmic, score: 8.96.
  
 
  0.622
Your Current Organism:
Parabacteroides johnsonii
NCBI taxonomy Id: 537006
Other names: P. johnsonii DSM 18315, Parabacteroides johnsonii DSM 18315, Parabacteroides johnsonii JCM 13406, Parabacteroides johnsonii M-165, Parabacteroides johnsonii str. DSM 18315, Parabacteroides johnsonii strain DSM 18315
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.