STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pdxBKEGG: pho:PH0597 3.5e-65 D-3-phosphoglycerate dehydrogenase K00015; Psort location: Cytoplasmic, score: 9.97; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. (320 aa)    
Predicted Functional Partners:
nifJ
KEGG: bth:BT1747 0. pyruvate-flavodoxin oxidoreductase K03737; Psort location: Cytoplasmic, score: 8.96.
    
  0.844
EEC94294.1
FAD linked oxidase, C-terminal domain protein; KEGG: rru:Rru_A1410 5.0e-222 4Fe-4S ferredoxin K00102; Psort location: Cytoplasmic, score: 8.96.
   
 0.829
EEC96489.1
Phosphate acetyl/butyryl transferase; KEGG: bfs:BF3408 2.6e-307 maeB; putative NADP-dependent malic enzyme K00029; Psort location: Cytoplasmic, score: 8.96.
   
 0.823
EEC98022.1
TIGR02757 family protein.
 
     0.807
EEC97202.1
Aldehyde dehydrogenase (NAD) family protein; KEGG: eca:ECA0118 1.5e-178 aldA, ald; aldehyde dehydrogenase A K07248:K00138; Psort location: Cytoplasmic, score: 9.26.
 
 
 0.807
EEC98023.1
DNA alkylation repair enzyme.
       0.783
EEC96401.1
Transketolase, C-terminal domain protein; KEGG: bth:BT0312 0. 2-oxoisovalerate dehydrogenase alpha subunit / 2-oxoisovalerate dehydrogenase beta subunit K00166:K00167.
  
 
 0.780
EEC96014.1
D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain protein; KEGG: tko:TK0551 4.3e-18 D-isomer specific 2-hydroxyacid dehydrogenase K00058; Psort location: Cytoplasmic, score: 8.96.
  
  
 
0.780
EEC98025.1
Hypothetical protein.
       0.773
EEC97375.1
Glycerate kinase; KEGG: bth:BT1437 1.1e-134 glycerate kinase K00865; Belongs to the glycerate kinase type-1 family.
    
 0.766
Your Current Organism:
Parabacteroides johnsonii
NCBI taxonomy Id: 537006
Other names: P. johnsonii DSM 18315, Parabacteroides johnsonii DSM 18315, Parabacteroides johnsonii JCM 13406, Parabacteroides johnsonii M-165, Parabacteroides johnsonii str. DSM 18315, Parabacteroides johnsonii strain DSM 18315
Server load: medium (64%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.