STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
feoBFerrous iron transport protein B; Probable transporter of a GTP-driven Fe(2+) uptake system. Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. FeoB GTPase (TC 9.A.8) family. (826 aa)    
Predicted Functional Partners:
EEC97667.1
Hypothetical protein.
       0.778
nifJ
KEGG: bth:BT1747 0. pyruvate-flavodoxin oxidoreductase K03737; Psort location: Cytoplasmic, score: 8.96.
 
   
 0.694
EEC97669.1
Putative 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase; KEGG: mta:Moth_0139 1.2e-11 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase K00950.
  
    0.552
EEC97666.1
ApbE family protein; Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein.
       0.501
secD
Export membrane protein SecD; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA; Belongs to the SecD/SecF family. SecD subfamily.
      
 0.493
EEC97010.1
Putative cytochrome c-type biogenesis protein CcsB; KEGG: sat:SYN_00150 6.7e-31 heme export protein apocytochrome heme-lyase; Psort location: CytoplasmicMembrane, score: 10.00.
     
 0.473
EEC96285.1
Cation diffusion facilitator family transporter; KEGG: mja:MJ0449 5.0e-34 cation efflux system protein K01529; Psort location: CytoplasmicMembrane, score: 10.00; Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family.
     
 0.467
EEC94156.1
MotA/TolQ/ExbB proton channel family protein.
 
  
 0.458
EEC98547.1
Transporter, MotA/TolQ/ExbB proton channel family protein.
 
  
 0.447
EEC97085.1
Iron chelate uptake ABC transporter, FeCT family, permease protein; KEGG: noc:Noc_1766 0.00095 cytochrome c oxidase K02274; Psort location: CytoplasmicMembrane, score: 10.00; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
   
 
 0.443
Your Current Organism:
Parabacteroides johnsonii
NCBI taxonomy Id: 537006
Other names: P. johnsonii DSM 18315, Parabacteroides johnsonii DSM 18315, Parabacteroides johnsonii JCM 13406, Parabacteroides johnsonii M-165, Parabacteroides johnsonii str. DSM 18315, Parabacteroides johnsonii strain DSM 18315
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