STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEC97646.1Hypothetical protein. (93 aa)    
Predicted Functional Partners:
EEC97670.1
Hypothetical protein.
      0.931
EEC97647.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
       0.778
EEC97648.1
Hypothetical protein; KEGG: mma:MM1142 0.0022 glycosyltransferase K00754.
       0.778
EEC97649.1
Hypothetical protein.
       0.778
EEC97650.1
N-acetylglucosaminylphosphatidylinositol deacetylase; Psort location: Cytoplasmic, score: 8.96.
       0.751
EEC97651.1
Hypothetical protein.
       0.751
recA
RecA protein; Can catalyze the hydrolysis of ATP in the presence of single- stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage; Belongs to the RecA family.
       0.490
EEC97653.1
Antioxidant, AhpC/TSA family; KEGG: chu:CHU_0565 8.6e-39 bcp; bacterioferritin comigratory protein K00435; Psort location: Cytoplasmic, score: 9.26.
       0.490
EEC97654.1
Radical SAM domain protein; KEGG: afu:AF0918 0.00022 act-2; pyruvate formate-lyase activating enzyme (act-2) K00538; Psort location: Cytoplasmic, score: 8.96.
       0.490
Your Current Organism:
Parabacteroides johnsonii
NCBI taxonomy Id: 537006
Other names: P. johnsonii DSM 18315, Parabacteroides johnsonii DSM 18315, Parabacteroides johnsonii JCM 13406, Parabacteroides johnsonii M-165, Parabacteroides johnsonii str. DSM 18315, Parabacteroides johnsonii strain DSM 18315
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.