STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEC97578.1Hypothetical protein. (113 aa)    
Predicted Functional Partners:
EEC97595.1
Glycosyl hydrolase family 2, sugar binding domain protein.
     0.986
EEC96123.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
  
     0.739
EEC97687.1
Glycosyl hydrolase family 2, sugar binding domain protein.
 
     0.733
EEC98267.1
Glycosyl hydrolase family 2, sugar binding domain protein; KEGG: sde:Sde_2632 0.0031 HflK K01195; Belongs to the glycosyl hydrolase 2 family.
 
     0.709
EEC96122.1
Hypothetical protein.
 
  
  0.676
EEC98116.1
SusD family protein.
  
 
   0.670
EEC95966.1
Glycosyl hydrolase, family 88.
 
 0.668
EEC97919.1
SusD family protein.
  
 
   0.646
EEC96680.1
Tetratricopeptide repeat protein.
  
 
   0.646
guaA
GMP synthase (glutamine-hydrolyzing) domain protein; Catalyzes the synthesis of GMP from XMP.
    
  0.637
Your Current Organism:
Parabacteroides johnsonii
NCBI taxonomy Id: 537006
Other names: P. johnsonii DSM 18315, Parabacteroides johnsonii DSM 18315, Parabacteroides johnsonii JCM 13406, Parabacteroides johnsonii M-165, Parabacteroides johnsonii str. DSM 18315, Parabacteroides johnsonii strain DSM 18315
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.