STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEC97582.1Putative bacteriocin export ABC transporter, lactococcin 972 group; KEGG: fal:FRAAL6466 6.4e-50 ABC-type transport systems, involved in lipoprotein release, ATPase components K06020; Psort location: CytoplasmicMembrane, score: 7.88. (226 aa)    
Predicted Functional Partners:
EEC95709.1
Efflux ABC transporter, permease protein; KEGG: bur:Bcep18194_B0724 1.9e-08 hypothetical protein K06020; Psort location: CytoplasmicMembrane, score: 10.00.
 
 0.991
EEC94386.1
Efflux ABC transporter, permease protein; KEGG: cch:Cag_0337 0.00033 ATPase K06020; Psort location: CytoplasmicMembrane, score: 10.00.
 
 0.991
EEC97744.1
Efflux ABC transporter, permease protein; KEGG: cch:Cag_0337 4.2e-78 ATPase K06020; Psort location: CytoplasmicMembrane, score: 9.99.
 
   0.972
EEC94387.1
KEGG: pen:PSEEN3665 0.00012 efflux ABC transporter, ATP-binding/permease protein; Psort location: CytoplasmicMembrane, score: 10.00.
 
 0.948
EEC97580.1
KEGG: pen:PSEEN3042 0.0011 macB; macrolide ABC efflux protein MacB; Psort location: CytoplasmicMembrane, score: 10.00.
 
   0.944
EEC94388.1
Efflux ABC transporter, permease protein; KEGG: bur:Bcep18194_B0724 0.0094 hypothetical protein K06020; Psort location: CytoplasmicMembrane, score: 10.00.
 
 0.944
EEC95648.1
Efflux ABC transporter, permease protein; KEGG: cch:Cag_0337 7.3e-05 ATPase K06020; Psort location: CytoplasmicMembrane, score: 10.00.
 
  0.887
EEC98576.1
Efflux ABC transporter, permease protein; KEGG: cch:Cag_0337 1.3e-06 ATPase K06020; Psort location: CytoplasmicMembrane, score: 10.00.
 
  0.883
EEC98582.1
Efflux ABC transporter, permease protein.
 
  0.872
EEC98581.1
Efflux ABC transporter, permease protein; Psort location: CytoplasmicMembrane, score: 10.00.
 
  0.857
Your Current Organism:
Parabacteroides johnsonii
NCBI taxonomy Id: 537006
Other names: P. johnsonii DSM 18315, Parabacteroides johnsonii DSM 18315, Parabacteroides johnsonii JCM 13406, Parabacteroides johnsonii M-165, Parabacteroides johnsonii str. DSM 18315, Parabacteroides johnsonii strain DSM 18315
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