STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEC97013.1Endoribonuclease L-PSP; Psort location: Cytoplasmic, score: 8.96. (364 aa)    
Predicted Functional Partners:
EEC97014.1
Hypothetical protein; KEGG: sit:TM1040_3135 3.3e-06 cytochrome-c peroxidase K00428.
 
     0.948
EEC97012.1
Hypothetical protein.
 
     0.880
EEC97011.1
Hypothetical protein; KEGG: ava:Ava_5054 1.8e-14 serine/threonine protein kinase K00908; Psort location: Periplasmic, score: 9.83.
 
     0.849
EEC97007.1
Putative dihydroxyacetone kinase subunit DhaL; KEGG: psb:Psyr_2565 3.5e-09 Dak phosphatase K05879.
 
    0.810
EEC97025.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
 
     0.802
EEC95967.1
Hypothetical protein; KEGG: ava:Ava_5054 7.2e-12 serine/threonine protein kinase K00908; Psort location: OuterMembrane, score: 9.49.
 
     0.774
EEC97441.1
Putative 3-deoxy-7-phosphoheptulonate synthase; KEGG: bth:BT3934 5.6e-154 phospho-2-dehydro-3-deoxyheptonate aldolase / chorismate mutase K04516:K03856; Psort location: Cytoplasmic, score: 8.96.
  
 
  0.763
EEC97994.1
Hypothetical protein.
  
     0.762
aroC
Chorismate synthase; Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system.
  
 
  0.755
EEC94508.1
Hypothetical protein.
  
     0.754
Your Current Organism:
Parabacteroides johnsonii
NCBI taxonomy Id: 537006
Other names: P. johnsonii DSM 18315, Parabacteroides johnsonii DSM 18315, Parabacteroides johnsonii JCM 13406, Parabacteroides johnsonii M-165, Parabacteroides johnsonii str. DSM 18315, Parabacteroides johnsonii strain DSM 18315
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.