STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEC96997.1Hypothetical protein. (446 aa)    
Predicted Functional Partners:
EEC96998.1
KEGG: bpm:BURPS1710b_A2293 0.0066 TetR-family regulatory protein K00356; Psort location: Cytoplasmic, score: 8.96.
 
     0.937
EEC97006.1
Hypothetical protein.
 
  0.887
EEC97002.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 9.46; ORF located using Blastx.
 
     0.787
EEC97003.1
ABC-2 type transporter; KEGG: fal:FRAAL1796 7.2e-11 putative ABC transporter ATP-binding subunit; Psort location: CytoplasmicMembrane, score: 10.00.
 
     0.786
EEC97005.1
KEGG: bur:Bcep18194_B1745 7.9e-52 ABC transporter, ATPase subunit K01990; Psort location: Cytoplasmic, score: 9.12.
 
     0.782
EEC97004.1
ABC transporter, ATP-binding protein; KEGG: rru:Rru_A1792 5.1e-57 ABC transporter component K01990; Psort location: CytoplasmicMembrane, score: 9.82.
 
     0.773
EEC96414.1
Efflux transporter, RND family, MFP subunit; KEGG: mfl:Mfl519 0.00085 phosphoenolpyruvate-protein phosphotransferase K02766; Psort location: CytoplasmicMembrane, score: 8.02; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
   
  0.560
EEC96999.1
Hypothetical protein; KEGG: sde:Sde_0822 0.00042 alpha-L-arabinofuranosidase K01209.
       0.558
EEC98524.1
Hypothetical protein; KEGG: afu:AF0713 0.0022 hisA-1; phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase K01814.
 
  0.539
EEC95933.1
Auxiliary transport protein, membrane fusion protein (MFP) family protein.
 
  0.538
Your Current Organism:
Parabacteroides johnsonii
NCBI taxonomy Id: 537006
Other names: P. johnsonii DSM 18315, Parabacteroides johnsonii DSM 18315, Parabacteroides johnsonii JCM 13406, Parabacteroides johnsonii M-165, Parabacteroides johnsonii str. DSM 18315, Parabacteroides johnsonii strain DSM 18315
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