STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEC96940.1Hypothetical protein. (63 aa)    
Predicted Functional Partners:
EEC96941.1
Hypothetical protein.
       0.572
EEC96942.1
Efflux transporter, RND family, MFP subunit; KEGG: ctc:CTC01995 0.0014 2',3'-cyclic-nucleotide 2'-phosphodiesterase K01119; Psort location: CytoplasmicMembrane, score: 8.02; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
       0.570
EEC96944.1
Outer membrane efflux protein; KEGG: ter:Tery_1925 0.00033 protein-tyrosine kinase K08252; Psort location: OuterMembrane, score: 9.92.
       0.434
czcA-2
Heavy metal efflux pump, CzcA family; KEGG: eci:UTI89_C2351 2.3e-86 yegO; hypothetical protein YegO K07789; Psort location: CytoplasmicMembrane, score: 10.00; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
       0.406
Your Current Organism:
Parabacteroides johnsonii
NCBI taxonomy Id: 537006
Other names: P. johnsonii DSM 18315, Parabacteroides johnsonii DSM 18315, Parabacteroides johnsonii JCM 13406, Parabacteroides johnsonii M-165, Parabacteroides johnsonii str. DSM 18315, Parabacteroides johnsonii strain DSM 18315
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.