STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEC96902.1O-GlcNAcase BT_4395; KEGG: cpf:CPF_0184 5.3e-43 nagH; hyaluronidase K01197. (832 aa)    
Predicted Functional Partners:
EEC96891.1
F5/8 type C domain protein; KEGG: aba:Acid345_0650 1.3e-33 alpha-glucosidase K01187; Psort location: OuterMembrane, score: 9.49.
 
 
 0.666
EEC98144.1
KEGG: ath:At5g13690 2.4e-103 MSH12.16; alpha-N-acetylglucosaminidase K01205.
 
 
 0.640
EEC95447.1
Beta-lactamase; KEGG: chu:CHU_0013 4.5e-184 nagA; b-glycosidase, glycoside hydrolase family 3 protein K01188; Psort location: Cytoplasmic, score: 9.26.
    
 0.616
EEC97487.1
Hypothetical protein.
  
     0.562
EEC98064.1
KEGG: rba:RB3348 6.2e-100 N-acylglucosamine 2-epimerase K01787.
 
  
  0.556
EEC96903.1
Hypothetical protein.
 
     0.542
EEC98067.1
Cyclically-permuted mutarotase family protein; KEGG: rba:RB10048 3.1e-82 sialic acid-specific 9-O-acetylesterase.
  
     0.534
EEC98066.1
BNR/Asp-box repeat protein; KEGG: bth:BT0455 7.2e-193 sialidase (neuraminidase) K01186.
 
 
 0.497
glaB
Alpha-1,3-galactosidase B.
  
     0.485
EEC97504.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
  
     0.482
Your Current Organism:
Parabacteroides johnsonii
NCBI taxonomy Id: 537006
Other names: P. johnsonii DSM 18315, Parabacteroides johnsonii DSM 18315, Parabacteroides johnsonii JCM 13406, Parabacteroides johnsonii M-165, Parabacteroides johnsonii str. DSM 18315, Parabacteroides johnsonii strain DSM 18315
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.