STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEC96829.1Peptidase, M24 family; KEGG: gsu:GSU1105 3.7e-54 pepQ-1; xaa-pro dipeptidase K01271. (390 aa)    
Predicted Functional Partners:
EEC96827.1
Hypothetical protein; KEGG: pgi:PG0890 8.4e-35 alkaline phosphatase, putative K01077; Belongs to the alkaline phosphatase family.
 
  
  0.764
EEC96677.1
Putative inosine-5'-monophosphate dehydrogenase; KEGG: bfs:BF3343 2.1e-232 impDH; inositol-5-monophosphate dehydrogenase K00088.
   
   0.677
guaB
Inosine-5'-monophosphate dehydrogenase; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth. Belongs to the IMPDH/GMPR family.
   
   0.677
EEC96830.1
Peptidase, M48 family; KEGG: bfr:BF1889 1.0e-113 putative protease K03799; Psort location: CytoplasmicMembrane, score: 9.46.
  
  
 0.613
gcvT
Aminomethyltransferase; The glycine cleavage system catalyzes the degradation of glycine.
  
 0.527
EEC94784.1
Cupin domain protein; KEGG: psp:PSPPH_2917 1.0e-12 DNA-binding protein K00517.
 
 
 0.489
EEC97627.1
OmpA family protein.
  
     0.484
EEC97563.1
Hypothetical protein.
  
     0.477
EEC95811.1
Pyridine nucleotide-disulfide oxidoreductase; KEGG: btl:BALH_0703 3.2e-135 ndh; NADH dehydrogenase K00356; Psort location: Cytoplasmic, score: 9.97.
    
 0.475
EEC95812.1
Hypothetical protein; Belongs to the sulfur carrier protein TusA family.
    
 0.475
Your Current Organism:
Parabacteroides johnsonii
NCBI taxonomy Id: 537006
Other names: P. johnsonii DSM 18315, Parabacteroides johnsonii DSM 18315, Parabacteroides johnsonii JCM 13406, Parabacteroides johnsonii M-165, Parabacteroides johnsonii str. DSM 18315, Parabacteroides johnsonii strain DSM 18315
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.