STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEC96594.1Hypothetical protein. (343 aa)    
Predicted Functional Partners:
EEC96593.1
Hypothetical protein; ORF located using Blastx.
 
     0.791
recQ
KEGG: bfs:BF3249 9.9e-196 recQ2; putative ATP-dependent DNA helicase K03654.
       0.629
EEC96682.1
Hypothetical protein.
  
     0.593
EEC94464.1
Hypothetical protein.
  
     0.481
EEC96947.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 10.00.
  
     0.473
EEC94862.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
  
     0.473
EEC94913.1
Arginase family protein; KEGG: hhe:HH1048 1.1e-72 rocF; arginase K01476; Psort location: Cytoplasmic, score: 8.96; Belongs to the arginase family.
  
   
 0.451
EEC96596.1
Hypothetical protein.
       0.449
murB
UDP-N-acetylmuramate dehydrogenase; Cell wall formation.
    
 0.434
EEC95822.1
Hypothetical protein.
  
     0.430
Your Current Organism:
Parabacteroides johnsonii
NCBI taxonomy Id: 537006
Other names: P. johnsonii DSM 18315, Parabacteroides johnsonii DSM 18315, Parabacteroides johnsonii JCM 13406, Parabacteroides johnsonii M-165, Parabacteroides johnsonii str. DSM 18315, Parabacteroides johnsonii strain DSM 18315
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.