STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEC96501.1Hypothetical protein. (122 aa)    
Predicted Functional Partners:
EEC96516.1
Hypothetical protein.
     0.983
EEC96502.1
LysM domain protein; KEGG: msu:MS1515 7.5e-10 amiC; N-acetylmuramoyl-L-alanine amidase K01448.
 
     0.849
EEC97485.1
Hypothetical protein; KEGG: pgi:PG0794 6.8e-10 penicillin-binding protein 1A, putative K05366.
  
     0.770
EEC95136.1
Tetratricopeptide repeat protein.
  
    0.768
EEC95860.1
Hypothetical protein.
  
     0.763
hup-8
DNA-binding protein HU; KEGG: noc:Noc_1406 7.1e-05 cation transport ATPase K01537; Psort location: Cytoplasmic, score: 8.96; Belongs to the bacterial histone-like protein family.
  
    0.758
EEC97563.1
Hypothetical protein.
  
     0.756
EEC96756.1
Hypothetical protein.
  
     0.756
EEC96223.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
  
     0.755
EEC94627.1
BNR/Asp-box repeat protein.
  
    0.753
Your Current Organism:
Parabacteroides johnsonii
NCBI taxonomy Id: 537006
Other names: P. johnsonii DSM 18315, Parabacteroides johnsonii DSM 18315, Parabacteroides johnsonii JCM 13406, Parabacteroides johnsonii M-165, Parabacteroides johnsonii str. DSM 18315, Parabacteroides johnsonii strain DSM 18315
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.