STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEC96492.1TonB-dependent receptor; KEGG: shn:Shewana3_3063 4.5e-10 phosphatidylglycerophosphatase K01094; Psort location: OuterMembrane, score: 9.92. (752 aa)    
Predicted Functional Partners:
EEC96490.1
Hypothetical protein.
       0.537
EEC96491.1
Hypothetical protein.
       0.537
EEC98545.1
TonB family domain protein; KEGG: bar:GBAA2345 1.3e-09 penicillin-binding protein 1A K05366; Psort location: CytoplasmicMembrane, score: 8.02.
  
   0.532
EEC94654.1
TonB-dependent receptor; Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy-requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins. Belongs to the TonB family.
  
 
 0.506
EEC96161.1
Hypothetical protein.
  
     0.491
EEC94641.1
Hypothetical protein.
 
    0.480
EEC94639.1
Transporter, MotA/TolQ/ExbB proton channel family protein; Psort location: CytoplasmicMembrane, score: 9.46.
 
    0.465
EEC96703.1
Tetratricopeptide repeat protein; Psort location: Cytoplasmic, score: 8.96.
  
    0.439
EEC96723.1
Hypothetical protein.
  
     0.437
EEC94642.1
Hypothetical protein.
 
    0.436
Your Current Organism:
Parabacteroides johnsonii
NCBI taxonomy Id: 537006
Other names: P. johnsonii DSM 18315, Parabacteroides johnsonii DSM 18315, Parabacteroides johnsonii JCM 13406, Parabacteroides johnsonii M-165, Parabacteroides johnsonii str. DSM 18315, Parabacteroides johnsonii strain DSM 18315
Server load: medium (42%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.