STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEC96416.1Bacterial alpha-L-rhamnosidase; KEGG: rba:RB700 2.1e-21 ramA; alfa-L-rhamnosidase. (208 aa)    
Predicted Functional Partners:
EEC96421.1
Alpha-L-rhamnosidase N-terminal domain protein; KEGG: bcz:BCZK2019 9.9e-42 ramA; alfa-L-rhamnosidase.
 
     0.976
EEC94143.1
Bacterial alpha-L-rhamnosidase; KEGG: rba:RB700 4.7e-38 ramA; alfa-L-rhamnosidase.
 
     0.976
EEC96417.1
KEGG: ret:RHE_PC00040 9.0e-15 putative alpha-L-rhamnosidase protein.
 
     0.938
EEC96420.1
KEGG: lpl:lp_3471 2.4e-26 ram1; alpha-L-rhamnosidase (putative).
 
     0.756
EEC96418.1
Hypothetical protein.
       0.678
EEC96789.1
Alpha-L-rhamnosidase N-terminal domain protein; KEGG: lpl:lp_3471 1.6e-15 ram1; alpha-L-rhamnosidase (putative).
 
     0.663
EEC97988.1
Hypothetical protein; Catalyzes the conversion of L-arabinose to L-ribulose.
  
     0.601
EEC96574.1
KEGG: lpl:lp_3473 6.1e-93 ram2; alpha-L-rhamnosidase (putative).
 
     0.562
EEC96434.1
Carbohydrate kinase, FGGY family protein; KEGG: bth:BT3763 1.9e-82 rhamnulose kinase/L-fuculose kinase K00848.
 
    0.562
EEC96433.1
Carbohydrate kinase, FGGY family protein; KEGG: bth:BT3763 1.2e-48 rhamnulose kinase/L-fuculose kinase K00848.
 
    0.548
Your Current Organism:
Parabacteroides johnsonii
NCBI taxonomy Id: 537006
Other names: P. johnsonii DSM 18315, Parabacteroides johnsonii DSM 18315, Parabacteroides johnsonii JCM 13406, Parabacteroides johnsonii M-165, Parabacteroides johnsonii str. DSM 18315, Parabacteroides johnsonii strain DSM 18315
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.