STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEC96402.1KEGG: bth:BT0311 4.1e-158 lipoamide acyltransferase component of branched-chain alpha-keto acid dehydrogenase complex K00680; Psort location: Cytoplasmic, score: 9.26. (458 aa)    
Predicted Functional Partners:
EEC96401.1
Transketolase, C-terminal domain protein; KEGG: bth:BT0312 0. 2-oxoisovalerate dehydrogenase alpha subunit / 2-oxoisovalerate dehydrogenase beta subunit K00166:K00167.
 0.999
lpdA-2
Dihydrolipoyl dehydrogenase; KEGG: bfr:BF1618 1.0e-170 dihydrolipoamide dehydrogenase K00382; Psort location: Cytoplasmic, score: 9.97.
 0.999
lpdA
Dihydrolipoyl dehydrogenase; KEGG: pgi:PG0802 4.1e-158 pdhD; alpha keto acid dehydrogenase complex, E3 component, lipoamide dehydrogenase K00382; Psort location: Cytoplasmic, score: 9.97.
 0.998
EEC97376.1
Pyridine nucleotide-disulfide oxidoreductase; KEGG: ssn:SSO_0320 2.2e-120 ykgC; putative oxidoreductase K00520; Psort location: Cytoplasmic, score: 9.26.
 0.996
EEC96403.1
KEGG: tte:TTE0297 5.4e-53 lplA; Lipoate-protein ligase A K03800; Psort location: Cytoplasmic, score: 9.26.
 
 0.993
prs
KEGG: pgi:PG2097 1.7e-136 prsA; ribose-phosphate pyrophosphokinase K00948.
   
 0.975
gcvH
Glycine cleavage system H protein; The glycine cleavage system catalyzes the degradation of glycine. The H protein shuttles the methylamine group of glycine from the P protein to the T protein.
 
 0.944
nifJ
KEGG: bth:BT1747 0. pyruvate-flavodoxin oxidoreductase K03737; Psort location: Cytoplasmic, score: 8.96.
  
 0.940
EEC96440.1
KEGG: bfs:BF3541 4.7e-205 putative citrate synthase K01647; Psort location: Cytoplasmic, score: 9.97.
 
 0.936
EEC96489.1
Phosphate acetyl/butyryl transferase; KEGG: bfs:BF3408 2.6e-307 maeB; putative NADP-dependent malic enzyme K00029; Psort location: Cytoplasmic, score: 8.96.
 
 
 0.930
Your Current Organism:
Parabacteroides johnsonii
NCBI taxonomy Id: 537006
Other names: P. johnsonii DSM 18315, Parabacteroides johnsonii DSM 18315, Parabacteroides johnsonii JCM 13406, Parabacteroides johnsonii M-165, Parabacteroides johnsonii str. DSM 18315, Parabacteroides johnsonii strain DSM 18315
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