STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEC96193.1Transporter, small conductance mechanosensitive ion channel MscS family protein; Psort location: CytoplasmicMembrane, score: 10.00. (279 aa)    
Predicted Functional Partners:
EEC96194.1
KEGG: cyb:CYB_1515 1.3e-08 tetratricopeptide repeat/protein kinase domain protein K08884.
       0.519
gcvP
KEGG: pgi:PG1305 0. gcvP; glycine cleavage system P protein K00282:K00283; Psort location: Cytoplasmic, score: 8.96; Belongs to the GcvP family.
   
    0.442
EEC97297.1
K+-dependent Na+/Ca+ exchanger family protein; Psort location: CytoplasmicMembrane, score: 10.00.
 
    0.435
EEC96195.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 10.00.
       0.432
Your Current Organism:
Parabacteroides johnsonii
NCBI taxonomy Id: 537006
Other names: P. johnsonii DSM 18315, Parabacteroides johnsonii DSM 18315, Parabacteroides johnsonii JCM 13406, Parabacteroides johnsonii M-165, Parabacteroides johnsonii str. DSM 18315, Parabacteroides johnsonii strain DSM 18315
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.