STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEC96194.1KEGG: cyb:CYB_1515 1.3e-08 tetratricopeptide repeat/protein kinase domain protein K08884. (274 aa)    
Predicted Functional Partners:
EEC94268.1
KEGG: cyb:CYB_1515 3.9e-21 tetratricopeptide repeat/protein kinase domain protein K08884.
 
     0.731
ribB
3,4-dihydroxy-2-butanone-4-phosphate synthase; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; In the C-terminal section; belongs to the GTP cyclohydrolase II family.
    
  0.710
EEC98208.1
Tetratricopeptide repeat protein; KEGG: ava:Ava_1552 9.6e-05 serine/threonine protein kinase with TPR repeats K00908.
 
  
 0.675
EEC98087.1
Tetratricopeptide repeat protein; KEGG: rno:26295 2.6e-10 Ogt; O-linked N-acetylglucosamine (GlcNAc) transferase (UDP-N-acetylglucosamine:polypeptide-N-acetylglucosaminyl transferase) K00754.
 
  
 0.664
EEC96195.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 10.00.
       0.631
EEC96193.1
Transporter, small conductance mechanosensitive ion channel MscS family protein; Psort location: CytoplasmicMembrane, score: 10.00.
       0.519
EEC98085.1
Peptidase, M23 family; KEGG: ava:Ava_0183 2.2e-12 peptidase M23B K08259.
   
   0.440
EEC95617.1
Peptidase, M23 family; KEGG: mxa:MXAN_5348 8.2e-18 M23 peptidase domain protein.
   
   0.440
EEC95888.1
Tetratricopeptide repeat protein; KEGG: ava:Ava_1552 1.1e-06 serine/threonine protein kinase with TPR repeats K00908.
  
  
  0.436
EEC95664.1
Hypothetical protein.
  
     0.408
Your Current Organism:
Parabacteroides johnsonii
NCBI taxonomy Id: 537006
Other names: P. johnsonii DSM 18315, Parabacteroides johnsonii DSM 18315, Parabacteroides johnsonii JCM 13406, Parabacteroides johnsonii M-165, Parabacteroides johnsonii str. DSM 18315, Parabacteroides johnsonii strain DSM 18315
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