STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
mgsAPutative methylglyoxal synthase; Catalyzes the formation of methylglyoxal from dihydroxyacetone phosphate. (147 aa)    
Predicted Functional Partners:
EEC96221.1
tRNA nucleotidyltransferase/poly(A) polymerase family protein; KEGG: bth:BT1975 3.0e-194 tRNA nucleotidyltransferase K00970; Psort location: Cytoplasmic, score: 8.96; Belongs to the tRNA nucleotidyltransferase/poly(A) polymerase family.
  
  
 0.846
EEC96583.1
Glutamate synthase central domain protein; KEGG: bth:BT0553 0. glutamate synthase, large subunit K00265; Psort location: Cytoplasmic, score: 8.96.
    
  0.833
EEC96556.1
Class II glutamine amidotransferase; KEGG: bth:BT0553 8.3e-109 glutamate synthase, large subunit K00265; Psort location: Cytoplasmic, score: 8.96.
    
  0.833
dapB
Dihydrodipicolinate reductase; Catalyzes the conversion of 4-hydroxy-tetrahydrodipicolinate (HTPA) to tetrahydrodipicolinate; Belongs to the DapB family.
  
    0.756
EEC96618.1
Lincosamide resistance family protein; KEGG: ana:alr7069 0.00089 aminoglycoside adenylyltransferase; Psort location: Cytoplasmic, score: 8.96.
  
  
 0.742
EEC97125.1
Alcohol dehydrogenase, iron-dependent; KEGG: bsu:BG12364 3.0e-59 yugJ; probable NADH-dependent butanol dehydrogenase 1 K00100; Psort location: Cytoplasmic, score: 9.26.
  
 
 0.691
EEC94158.1
Hypothetical protein; KEGG: sec:SC3108 1.6e-53 yqhD; putative alcohol dehydrogenase K08325; Psort location: Cytoplasmic, score: 9.26.
  
 
 0.691
coaE
dephospho-CoA kinase; Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A; Belongs to the CoaE family.
 
    0.650
EEC95844.1
Lipid kinase, YegS/Rv2252/BmrU family; KEGG: syn:sll0036 1.4e-23 putative methylglyoxal synthase K01734.
   
  0.609
leuB
3-isopropylmalate dehydrogenase; Catalyzes the oxidation of 3-carboxy-2-hydroxy-4- methylpentanoate (3-isopropylmalate) to 3-carboxy-4-methyl-2- oxopentanoate. The product decarboxylates to 4-methyl-2 oxopentanoate.
       0.608
Your Current Organism:
Parabacteroides johnsonii
NCBI taxonomy Id: 537006
Other names: P. johnsonii DSM 18315, Parabacteroides johnsonii DSM 18315, Parabacteroides johnsonii JCM 13406, Parabacteroides johnsonii M-165, Parabacteroides johnsonii str. DSM 18315, Parabacteroides johnsonii strain DSM 18315
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